Denitrificimonas caeni: O6P33_03200
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Entry
O6P33_03200 CDS
T08709
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03030
DNA replication
dce03410
Base excision repair
dce03420
Nucleotide excision repair
dce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O6P33_03200 (polA)
03410 Base excision repair
O6P33_03200 (polA)
03420 Nucleotide excision repair
O6P33_03200 (polA)
03440 Homologous recombination
O6P33_03200 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dce03032
]
O6P33_03200 (polA)
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_03200 (polA)
Enzymes [BR:
dce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O6P33_03200 (polA)
DNA replication proteins [BR:
dce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O6P33_03200 (polA)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
O6P33_03200 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O6P33_03200 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WBE25865
UniProt:
A0AAE9VT16
LinkDB
All DBs
Position
658153..660927
Genome browser
AA seq
924 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLMTSTGMPTGAVKGVLNMLRSLQKQYPDSVVTVIFD
AKGPTFRDELFTEYKAQRPPMPDDLRVQIEPLHECVKAMGFPFLCVEGVEADDVIGTLAQ
SSTLAERAVVISTGDKDMAQLVNGHVSLVNTMYNTKLDSEGVVEKFGIGPELIIDYLALM
GDKSDNIPGVPGVGEKTALGLLVGLGDMDAIYNNIEQVATLPIRGAKTLGAKLLEHREMA
YLSRKLATIKTDVELDLNIDELHMQAPQDDILMDWYQRLEFKSWQDEIRRRTATSGSKKS
ASAGADLLTSAHEQAEAAAEHKAEFHTILTEADFAHWLQRLTAAQLFAFDTETTSIDAQQ
AQLVGISFAVAEGEGAYVPLAHSYMGVPQQLDEKTVLDALRPLLEDPQVLKVCQNGKYDI
NVLARYGIVVQGVQFDTMLESYVLNSTATRHDMDSLATRYLERSTIAFEDVAGKGAKQLT
FDQIDLAVAGPYAAEDAEITLCLHNRLLKELQQVPPLLEVLNTIEMPLMPVLARIERYGA
LVDAHLLGQHSLELTEKLTELERQTFAIAGEEFNLASPKQLGVILYEKLGLPVLAKTAKG
QPSTAEAVLSELAEQGHELPVLLMEYRSLSKLKSTYTDRLPEQINPLTGRIHTSYHQAVT
ATGRLSSSNPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDPGLL
DAFRHDRDVHKATAAEVFGVELDAVSSDQRRNAKAINFGLIYGMSAHGLAKQIGCERSEA
QMYMDRYFTRYPGVQDYMERTREQAREQGYVETLFGRRLYLPEIKAKNANIRKAAERTAI
NAPMQGSAADIIKRAMITVDHWLAESKLDARVILQVHDELVVEVREDQVEALRAGLLPLM
SAGADLDVPLIVEAGVGDNWDQAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggctcctttagttttggttgatggctcatcgtatttatatcgagcatttcac
gcattgccacctttgatgacttccacggggatgcccactggcgcggttaaaggagtgctg
aatatgctgcgcagtttgcaaaagcagtaccctgacagtgtagttacggtgatttttgat
gcgaaggggccgacttttcgtgatgagttattcaccgaatataaagcccaacgcccaccc
atgccggatgacttgcgggtgcagattgagccgctgcatgaatgtgtaaaagccatgggt
tttccttttttatgtgttgagggcgtcgaagctgatgatgtgattggcaccttagcgcaa
agcagtaccttggctgagcgggcagtggtgatctccaccggtgataaagatatggcgcag
ctggtcaacggccatgtcagcttggttaacaccatgtacaacaccaaactcgacagcgaa
ggtgtagtagaaaagtttggtattggccccgagctgattattgattatttagctttgatg
ggtgataaatccgacaatattcccggtgtacctggcgtgggtgaaaaaaccgcactgggc
ctattagttggcctgggtgatatggatgcgatttataacaatatcgagcaagtggccacc
ttgcctattcgcggcgctaaaaccctaggtgctaaattacttgagcaccgcgagatggcc
tatttatcgcgtaagctcgcgacgatcaaaacggatgttgagcttgatctcaatattgat
gagctacacatgcaggctccacaagacgatattttaatggactggtaccagcgcttagag
tttaaaagctggcaagatgaaattcgccgccgcaccgcgacatcaggcagtaaaaagtct
gcaagtgctggcgctgatttattgaccagtgcccatgagcaagcagaggctgcggctgag
cataaagctgagtttcataccattttgactgaagcagattttgctcactggctgcagcgt
ttaaccgccgcgcaactctttgcttttgatacggaaaccaccagtattgatgcacaacaa
gcgcaactggtggggatctcttttgctgttgctgagggggaaggggcttatgtgccttta
gcccatagttatatgggagtgccgcagcagttggatgaaaaaacagttttggatgcgttg
cggcccttgttagaagatccgcaagtgctgaaggtttgccaaaacggtaaatacgatatc
aatgttttagcccgttatggcattgttgtgcagggtgtgcagtttgacaccatgttggag
tcttatgtgctcaactccaccgccacacggcatgatatggatagcttggctactcgttac
ttagagcgcagcaccattgcttttgaagatgtcgcaggtaaaggcgcaaagcagctaacc
tttgatcaaattgatttggctgtggccgggccttatgccgcagaagatgcagaaatcacc
ttgtgtctgcacaatcgtttgcttaaagagttgcagcaggtaccgccgctgttggaggtg
cttaacaccattgagatgccattgatgccggtcttagcacgcattgagcgctacggcgcc
ttggtggatgcacatttgctcggtcagcacagtttggagttgaccgagaaactcacagag
ctggaacgccagacgtttgccattgccggtgaggagtttaacctggcttcgcctaagcag
ctgggcgttattttatatgaaaagctgggtttgccggttttagcgaaaactgctaaaggt
cagcccagcacagcggaagcagtattatctgagttggcagagcagggtcatgagttgcca
gtgctgctgatggagtaccgcagtttaagtaagctgaaaagcacctatacggaccgtttg
ccagagcaaattaatccgctgaccggtcgtattcacaccagttaccatcaggcagttact
gccactgggcgcttatcttcaagcaatccaaacttacagaatattcccattcgtacggct
gaaggacgccgtattcgccaagcttttgtggcacccaaaggttataagctattagccgcg
gactactcgcaaattgagttgcggattatggcgcatttagcccaagatccgggcttgctg
gatgccttccggcatgaccgtgatgtgcataaagccactgcagcagaagtgtttggggtg
gagctggatgcggtcagcagtgatcagcggcgcaatgctaaagccattaactttggtttg
atttatggcatgagtgcccacggcttagctaagcagattggttgcgagcggagcgaggcg
caaatgtatatggatcgctactttactcgctacccaggtgtacaagattatatggagcgc
acccgtgagcaggcgcgcgagcaaggctatgtggaaactctgtttggtcggcgcttgtat
ttaccagagattaaagcgaaaaacgccaatatccgtaaggctgctgagcgcaccgcgatt
aacgctccgatgcagggcagcgcggctgacatcattaagcgtgcgatgattactgtggac
cactggctggctgagtctaagctggatgcccgggttatcttgcaggtgcatgatgagctg
gtcgtagaagtgcgtgaagatcaagtagaggcgttgcgtgcgggtttattgccgttaatg
agtgctggcgctgatttagatgtgcctttaattgttgaggccggtgtgggtgataactgg
gatcaggcgcattaa
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