KEGG   Denitrificimonas caeni: O6P33_03200
Entry
O6P33_03200       CDS       T08709                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dce  Denitrificimonas caeni
Pathway
dce03030  DNA replication
dce03410  Base excision repair
dce03420  Nucleotide excision repair
dce03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    O6P33_03200 (polA)
   03410 Base excision repair
    O6P33_03200 (polA)
   03420 Nucleotide excision repair
    O6P33_03200 (polA)
   03440 Homologous recombination
    O6P33_03200 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dce03032]
    O6P33_03200 (polA)
   03400 DNA repair and recombination proteins [BR:dce03400]
    O6P33_03200 (polA)
Enzymes [BR:dce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     O6P33_03200 (polA)
DNA replication proteins [BR:dce03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     O6P33_03200 (polA)
DNA repair and recombination proteins [BR:dce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     O6P33_03200 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O6P33_03200 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: WBE25865
UniProt: A0AAE9VT16
LinkDB
Position
658153..660927
AA seq 924 aa
MSQAPLVLVDGSSYLYRAFHALPPLMTSTGMPTGAVKGVLNMLRSLQKQYPDSVVTVIFD
AKGPTFRDELFTEYKAQRPPMPDDLRVQIEPLHECVKAMGFPFLCVEGVEADDVIGTLAQ
SSTLAERAVVISTGDKDMAQLVNGHVSLVNTMYNTKLDSEGVVEKFGIGPELIIDYLALM
GDKSDNIPGVPGVGEKTALGLLVGLGDMDAIYNNIEQVATLPIRGAKTLGAKLLEHREMA
YLSRKLATIKTDVELDLNIDELHMQAPQDDILMDWYQRLEFKSWQDEIRRRTATSGSKKS
ASAGADLLTSAHEQAEAAAEHKAEFHTILTEADFAHWLQRLTAAQLFAFDTETTSIDAQQ
AQLVGISFAVAEGEGAYVPLAHSYMGVPQQLDEKTVLDALRPLLEDPQVLKVCQNGKYDI
NVLARYGIVVQGVQFDTMLESYVLNSTATRHDMDSLATRYLERSTIAFEDVAGKGAKQLT
FDQIDLAVAGPYAAEDAEITLCLHNRLLKELQQVPPLLEVLNTIEMPLMPVLARIERYGA
LVDAHLLGQHSLELTEKLTELERQTFAIAGEEFNLASPKQLGVILYEKLGLPVLAKTAKG
QPSTAEAVLSELAEQGHELPVLLMEYRSLSKLKSTYTDRLPEQINPLTGRIHTSYHQAVT
ATGRLSSSNPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDPGLL
DAFRHDRDVHKATAAEVFGVELDAVSSDQRRNAKAINFGLIYGMSAHGLAKQIGCERSEA
QMYMDRYFTRYPGVQDYMERTREQAREQGYVETLFGRRLYLPEIKAKNANIRKAAERTAI
NAPMQGSAADIIKRAMITVDHWLAESKLDARVILQVHDELVVEVREDQVEALRAGLLPLM
SAGADLDVPLIVEAGVGDNWDQAH
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtctcaggctcctttagttttggttgatggctcatcgtatttatatcgagcatttcac
gcattgccacctttgatgacttccacggggatgcccactggcgcggttaaaggagtgctg
aatatgctgcgcagtttgcaaaagcagtaccctgacagtgtagttacggtgatttttgat
gcgaaggggccgacttttcgtgatgagttattcaccgaatataaagcccaacgcccaccc
atgccggatgacttgcgggtgcagattgagccgctgcatgaatgtgtaaaagccatgggt
tttccttttttatgtgttgagggcgtcgaagctgatgatgtgattggcaccttagcgcaa
agcagtaccttggctgagcgggcagtggtgatctccaccggtgataaagatatggcgcag
ctggtcaacggccatgtcagcttggttaacaccatgtacaacaccaaactcgacagcgaa
ggtgtagtagaaaagtttggtattggccccgagctgattattgattatttagctttgatg
ggtgataaatccgacaatattcccggtgtacctggcgtgggtgaaaaaaccgcactgggc
ctattagttggcctgggtgatatggatgcgatttataacaatatcgagcaagtggccacc
ttgcctattcgcggcgctaaaaccctaggtgctaaattacttgagcaccgcgagatggcc
tatttatcgcgtaagctcgcgacgatcaaaacggatgttgagcttgatctcaatattgat
gagctacacatgcaggctccacaagacgatattttaatggactggtaccagcgcttagag
tttaaaagctggcaagatgaaattcgccgccgcaccgcgacatcaggcagtaaaaagtct
gcaagtgctggcgctgatttattgaccagtgcccatgagcaagcagaggctgcggctgag
cataaagctgagtttcataccattttgactgaagcagattttgctcactggctgcagcgt
ttaaccgccgcgcaactctttgcttttgatacggaaaccaccagtattgatgcacaacaa
gcgcaactggtggggatctcttttgctgttgctgagggggaaggggcttatgtgccttta
gcccatagttatatgggagtgccgcagcagttggatgaaaaaacagttttggatgcgttg
cggcccttgttagaagatccgcaagtgctgaaggtttgccaaaacggtaaatacgatatc
aatgttttagcccgttatggcattgttgtgcagggtgtgcagtttgacaccatgttggag
tcttatgtgctcaactccaccgccacacggcatgatatggatagcttggctactcgttac
ttagagcgcagcaccattgcttttgaagatgtcgcaggtaaaggcgcaaagcagctaacc
tttgatcaaattgatttggctgtggccgggccttatgccgcagaagatgcagaaatcacc
ttgtgtctgcacaatcgtttgcttaaagagttgcagcaggtaccgccgctgttggaggtg
cttaacaccattgagatgccattgatgccggtcttagcacgcattgagcgctacggcgcc
ttggtggatgcacatttgctcggtcagcacagtttggagttgaccgagaaactcacagag
ctggaacgccagacgtttgccattgccggtgaggagtttaacctggcttcgcctaagcag
ctgggcgttattttatatgaaaagctgggtttgccggttttagcgaaaactgctaaaggt
cagcccagcacagcggaagcagtattatctgagttggcagagcagggtcatgagttgcca
gtgctgctgatggagtaccgcagtttaagtaagctgaaaagcacctatacggaccgtttg
ccagagcaaattaatccgctgaccggtcgtattcacaccagttaccatcaggcagttact
gccactgggcgcttatcttcaagcaatccaaacttacagaatattcccattcgtacggct
gaaggacgccgtattcgccaagcttttgtggcacccaaaggttataagctattagccgcg
gactactcgcaaattgagttgcggattatggcgcatttagcccaagatccgggcttgctg
gatgccttccggcatgaccgtgatgtgcataaagccactgcagcagaagtgtttggggtg
gagctggatgcggtcagcagtgatcagcggcgcaatgctaaagccattaactttggtttg
atttatggcatgagtgcccacggcttagctaagcagattggttgcgagcggagcgaggcg
caaatgtatatggatcgctactttactcgctacccaggtgtacaagattatatggagcgc
acccgtgagcaggcgcgcgagcaaggctatgtggaaactctgtttggtcggcgcttgtat
ttaccagagattaaagcgaaaaacgccaatatccgtaaggctgctgagcgcaccgcgatt
aacgctccgatgcagggcagcgcggctgacatcattaagcgtgcgatgattactgtggac
cactggctggctgagtctaagctggatgcccgggttatcttgcaggtgcatgatgagctg
gtcgtagaagtgcgtgaagatcaagtagaggcgttgcgtgcgggtttattgccgttaatg
agtgctggcgctgatttagatgtgcctttaattgttgaggccggtgtgggtgataactgg
gatcaggcgcattaa

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