Denitrificimonas caeni: O6P33_04630
Help
Entry
O6P33_04630 CDS
T08709
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
dce
Denitrificimonas caeni
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_29
HTH_23
HTH_28
AAA_16
HTH_17
nSTAND3
TIP49
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WBE26121
UniProt:
A0AAE9VPZ2
LinkDB
All DBs
Position
complement(960399..961778)
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTQTILLVEDDSGLRELLQEELEAEGYQVTACGDAEQGLALLNSQIPDLLISDLRLPG
ADGLSLLPNLTHTDSAPAVLIITAFGSVQQAVKALQAGADDFLTKPLEMDHFLLTVSRLL
ENRKLRNEVQHYRSLLAVKQFNGMIGQSPAMQHMFHQIKQIADADGPVLIQGESGTGKEL
VARALHDQSSRRDGPYMVVNCGGIPSELMESEFFGHAAGAFTGARTQRAGLFQQANGGSL
LLDELGEMPLALQAKLLRVLQDGKVRPVGSDHEIQLDVRIIGATNRNLTEAVADGSFRED
LFYRLETFALQVPPLRARGADIQQLTEFFLTRFNARQKQSIKGFSDAALATLQSYSFPGN
VRELQNAVERAATFCDSPLIQARHLPQRIREQNNATDAPAISPVAVALANPAVEAEALPS
LETVQRQYIQQVLAATEGNKRRAADILGITRRTLYRWLE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacccaaactatcttgctggttgaagatgacagcggcttgcgtgagttactg
caagaagaactcgaagccgaaggctatcaagtcactgcctgtggcgatgccgagcaaggc
ctagcgctgctcaacagccagattcctgacctgttaatcagcgatttgcgtttaccaggg
gccgacggcctcagcttgttacccaaccttacccatacagactcagcacccgcggtactg
atcattacggcttttggctcagtgcagcaagcggtcaaagccctgcaagcaggcgctgat
gattttttaactaaacccttagaaatggatcactttttactgactgtgagccgtttgctc
gagaatagaaaactgcgcaatgaagtgcagcactaccgcagtttacttgcggttaaacag
ttcaatggcatgattggccaaagcccagccatgcagcatatgtttcatcaaataaaacaa
attgccgatgccgatggcccagtcttaattcaaggcgagagcggtactggtaaagaactt
gtggcccgtgccttgcacgatcaaagcagccgtcgcgatggtccctatatggtggtcaat
tgcggcggcattcccagcgagctgatggaaagcgagtttttcggccatgctgccggtgct
tttactggcgcacgcacacagcgtgctggcttatttcagcaagccaacggcggcagctta
ttgctcgacgaattgggggaaatgcccttagcattacaagccaaactgttgcgcgtgctc
caagacggcaaagtgcgtcctgtgggtagtgatcatgaaatccagctggatgtacgcatt
attggcgcaaccaaccgcaacctaaccgaagcagttgccgacggcagttttcgcgaggac
ctgttttaccgcttagaaacatttgccttgcaagtcccgccactgcgcgcacgcggcgca
gacattcaacaactcactgagttttttctaactcgttttaatgcccgacaaaaacaaagc
attaaaggctttagtgatgccgctttagccaccctgcaaagctacagttttccagggaat
gtacgtgagctgcaaaatgccgtggagcgcgcagccactttttgcgacagccccttgatc
caggctcggcacttgccgcaacggattcgtgaacaaaataacgccacagacgcccccgct
atcagccctgtggcagtagcgcttgccaacccagcggtcgaagctgaagccttacccagt
ttagaaaccgtgcagcgccaatatattcagcaagtactggccgcaactgaaggcaacaaa
cggcgagctgcagatattttaggcatcactcggcgaacgctgtatcgctggttagagtaa
DBGET
integrated database retrieval system
