Denitrificimonas caeni: O6P33_05585
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Entry
O6P33_05585 CDS
T08709
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O6P33_05585 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dce03019
]
O6P33_05585 (recQ)
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_05585 (recQ)
Enzymes [BR:
dce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O6P33_05585 (recQ)
Messenger RNA biogenesis [BR:
dce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O6P33_05585 (recQ)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O6P33_05585 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
ResIII
HTH_23
HTH_29
DnaD_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WBE26297
UniProt:
A0AAE9VRT6
LinkDB
All DBs
Position
complement(1164886..1167030)
Genome browser
AA seq
714 aa
AA seq
DB search
MQDQALQTLKSVFGYDAFRGQQSAIIERICAGNDALVLMPTGGGKSLCYQLPAVLLDGLT
VVVSPLIALMQDQVASLEELGVAAAALNSSLSHDEQREIAERLRRNEIKLLYLAPERLVK
PRMLAFLQHLPIRLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPNVPRIALTATADTRT
REEIITRLHLQSAECFLSSFDRPNIFYRITPKDNPRKQLLDFLAQRKGDAGIVYCLSRKS
VESTAEFLSSKGFPALPYHAGLDNNLRAFHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVLMLKQMLANSEGDERHKRVEQHK
LEAMLALCEETRCRRQALLAYFDEDMPEPCGHCDNCIDTIETWDATEAARQALSAIHRTG
QRYGVGYLSDVLQGRENDRVRALGHQHLSVFGIGKTLNDHQWRSLFRQLVARNLIDVDVE
GFGGLRLSESCRPLLRGETTLLLRRDLTPQTRPTRSASQASQLVRSHEREMWESLRTLRR
HLAEEHSVPPYVIFPDSTLLEMLREQPEDLDDMAQISGVGARKLERYGAAFLKVLNQQES
AASKPAPSSQDLRHELVTLARSGMTPEQIAQQMQCSLKNVYSLMAQAIAGNLLSLEQALD
LPEELIGQIQDAFLQSDGELPSVASIADQFTPQIEEGVLYCVRAALQAEFGSIV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcaggcgttacagacgctaaaaagtgtttttggctatgatgcgtttcgcggg
caacagtcagccatcattgagcgcatttgtgcaggcaatgatgcactcgtgctgatgccc
acaggcggcggtaaatccttgtgctatcaactgccagcagttctgctcgatggcttaact
gtggtggtatcaccactgatcgccttaatgcaggatcaagtcgcgagcttagaagagctt
ggcgttgccgctgcagcactgaactcatcactgagtcatgatgagcagcgtgaaattgct
gagcgattacgccgcaacgaaatcaaattactttacttggctccagagcgcttggtaaag
ccacgcatgctggcgtttttgcaacacttacccattcgcttatttgccattgacgaggcg
cactgtgtttcgcagtggggccatgactttcgcccagagtatttacagttagggcaactg
gcggaattattccccaatgtgccgcgcattgctttaaccgccactgccgacacccgtacg
cgcgaagaaatcattacccgcttgcatttgcaaagcgcagaatgttttctctcaagcttt
gatcggccgaacattttttatcgcatcacccctaaagacaacccgcgcaaacagctactg
gatttcttggcacaacgtaaaggggatgcagggatcgtctattgtttatcgcgtaaaagt
gtcgaatccactgctgagtttcttagtagcaaaggttttccagccctgccctatcatgcg
ggtctagacaataacctgcgcgccttccaccaaaagcgtttcctcaatgaggaaggttta
attatggtggccaccattgcttttggcatgggcattgataaatctaacgtgcgctttgtc
gcccacttggacctacctaaatctttagaagcctactaccaagaaaccggccgcgccgga
cgtgacggcctacctgctgatgcgtggatggtgtatggcctgcaagatgtactgatgctc
aagcagatgctcgccaactcagaaggtgacgagcggcacaagcgcgttgagcaacacaaa
ctagaagcaatgctggctctttgcgaagaaacccgctgccgccgccaagctttactggcc
tactttgatgaagacatgccggagccttgcggtcactgtgataactgcattgataccatt
gaaacctgggacgctactgaagctgcgcgccaagccttatcggcaattcaccgcaccggt
cagcgctatggggttggttatttatcagatgtgctacagggccgtgaaaatgatcgtgtg
cgtgctctaggccatcaacatttaagcgtatttgggatcggcaaaaccctcaatgaccat
cagtggcgctcgctgtttcgacagctggtggcgcgcaacctgattgatgtggatgtggaa
ggttttggcggactgcgcctatcggaaagctgccgaccattattgcgcggcgaaactaca
ctgttactgcgccgtgacctcacccctcaaacccgcccaacccgcagtgccagccaagcc
agtcaactggttcgcagccatgagcgcgagatgtgggaatcgttacgtactttgcgccgc
catttagctgaagagcacagtgtaccgccctatgtcattttccccgactcaactctctta
gaaatgctccgtgaacaaccagaagacctggatgacatggcgcagatcagcggtgtgggc
gcacgcaagctggaacgctacggtgctgcattcttaaaggttctcaatcaacaagaaagt
gccgccagcaagccagcaccgagcagccaggacttacgccacgagttagtgaccctagcc
cgcagcggcatgactccagaacagatcgcacaacagatgcagtgcagcctgaaaaatgtc
tactctttaatggcccaagccattgccggtaacttgttgagccttgaacaagctctcgac
ctgccggaagaattaatcgggcaaattcaggatgcttttttacaaagcgatggtgagctg
cccagtgttgccagtatcgcagaccagttcactccacagatcgaagaaggggtgctctac
tgcgtacgcgcagccttgcaagcagagtttggcagcattgtttaa
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