KEGG   Denitrificimonas caeni: O6P33_06710
Entry
O6P33_06710       CDS       T08709                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dce  Denitrificimonas caeni
Pathway
dce00010  Glycolysis / Gluconeogenesis
dce00020  Citrate cycle (TCA cycle)
dce00260  Glycine, serine and threonine metabolism
dce00280  Valine, leucine and isoleucine degradation
dce00310  Lysine degradation
dce00380  Tryptophan metabolism
dce00620  Pyruvate metabolism
dce00630  Glyoxylate and dicarboxylate metabolism
dce00640  Propanoate metabolism
dce00670  One carbon pool by folate
dce00785  Lipoic acid metabolism
dce01100  Metabolic pathways
dce01110  Biosynthesis of secondary metabolites
dce01120  Microbial metabolism in diverse environments
dce01200  Carbon metabolism
dce01210  2-Oxocarboxylic acid metabolism
dce01240  Biosynthesis of cofactors
Module
dce_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dce_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dce_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:dce00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    O6P33_06710 (lpdA)
   00020 Citrate cycle (TCA cycle)
    O6P33_06710 (lpdA)
   00620 Pyruvate metabolism
    O6P33_06710 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    O6P33_06710 (lpdA)
   00640 Propanoate metabolism
    O6P33_06710 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    O6P33_06710 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    O6P33_06710 (lpdA)
   00310 Lysine degradation
    O6P33_06710 (lpdA)
   00380 Tryptophan metabolism
    O6P33_06710 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    O6P33_06710 (lpdA)
   00670 One carbon pool by folate
    O6P33_06710 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dce04147]
    O6P33_06710 (lpdA)
Enzymes [BR:dce01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     O6P33_06710 (lpdA)
Exosome [BR:dce04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   O6P33_06710 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like GIDA FAD_oxidored NAD_binding_8 FAD_binding_3 AlaDh_PNT_C 3HCDH_N DAO Thi4 UDPG_MGDP_dh_N Lys_Orn_oxgnase 2-Hacid_dh_C Lycopene_cycl XdhC_C Amino_oxidase
Other DBs
NCBI-ProteinID: WBE26500
UniProt: A0AAF0AKG3
LinkDB
Position
1404559..1405995
AA seq 478 aa
MSQKFDVIVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKSGKLALGGTCLNVGCMPSKAL
LDSSWKYHEAQADFAVHGIDVKDVAIDVPAMIGRKDTIVKNLIGGIAGLFKANGVTTIEG
HGKLLANKQVEVTAADGTVQVYQAENVIIAAGSQPIDIPPAPVDQDVIVDSTGALDFQAV
PKRLGVIGAGVIGLELGSVWARLGAEVTVIEAQDKFLSAVDEQVAKEALKIFAKQKLDIR
LGARVTGSEVKDGEVTVNFTDAKGEQHMTFDKLIVAVGRRPVTNNVLSADSGVTIDERGF
IFVDDICATSVPGVYAVGDVVRGPMLAHKASEEGIMVAERIAGNKAQVNYDLIPSVIYTH
PEIAGVGQTEQQLKGDGVAINVGVFPFAASGRAMAANDTAGFVKIIADAETDRVLGVHVI
GPSAAELVQQGAIAMEFGSSAEDLGLMVFSHPTLSEALHEAALAVNGKAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagtcagaaatttgatgtaattgtcatcggtgcaggccctggtggctatgttgcggcg
attaaagcagcgcaactgggccttaaaacagcttgtatcgaaaaatatcaagacaaaagc
ggcaaattggcactgggcggtacctgcttaaacgtgggttgcatgccatctaaagcgttg
ctggatagctcttggaaataccatgaagctcaagctgattttgcggtacacggtattgac
gtcaaagacgttgcgatagatgtacccgcaatgattggccgtaaagatactattgtgaaa
aacctgattggcggtatcgctggcttatttaaagccaatggcgtgaccaccattgaaggg
cacggtaagttgctggctaacaagcaagttgaagtcactgcagcagacggcactgtgcaa
gtttaccaagcggaaaacgtgattatcgcagctggttcccagcccattgatattccgcca
gcaccggttgatcaagatgtcattgttgactctaccggcgcattggatttccaagccgta
ccgaaaagactgggcgttattggcgcgggtgtgattggtcttgagttgggttcagtctgg
gcacgtttaggtgctgaagtgactgtaatcgaggcacaagataagttcctttctgcagtc
gatgagcaagtggccaaagaagcattgaagatttttgctaagcaaaaacttgatattcgc
ttaggcgcacgagtgacaggttctgaagttaaagatggcgaagttactgttaacttcacc
gacgctaaaggcgagcaacacatgacttttgataagttaattgttgctgttggccgtcgt
ccagtcaccaacaatgtgttgtcggcagacagcggagtgaccatcgatgagcgtggcttt
atcttcgtcgatgatatctgtgcaaccagcgtacctggtgtgtatgcggtaggtgacgtg
gttcgtggcccaatgttggcgcacaaggcttcggaagaaggcattatggttgcagagcgc
attgctggtaataaagcgcaggtgaactatgacctgattccaagtgttatttacacccac
ccagaaattgctggtgttggtcaaactgagcagcagttgaaaggtgacggtgtggcaatc
aatgtgggtgtattcccatttgccgctagcggtcgtgctatggctgctaatgacaccgca
ggttttgtgaaaatcattgccgatgcagaaactgatcgcgttttaggtgtgcatgtgatt
ggcccaagtgctgcagagttagtgcaacagggcgcaattgcgatggagtttggctccagt
gctgaagatttaggcttgatggtgttctcgcacccaaccttatcggaagcgctccatgaa
gcggcgctcgccgtgaatgggaaagctattcatatagcaaaccgcaaaaaacgttga

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