Denitrificimonas caeni: O6P33_07230
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Entry
O6P33_07230 CDS
T08709
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dce
Denitrificimonas caeni
Pathway
dce00071
Fatty acid degradation
dce00280
Valine, leucine and isoleucine degradation
dce00310
Lysine degradation
dce00362
Benzoate degradation
dce00380
Tryptophan metabolism
dce00410
beta-Alanine metabolism
dce00640
Propanoate metabolism
dce00650
Butanoate metabolism
dce00907
Pinene, camphor and geraniol degradation
dce00930
Caprolactam degradation
dce01100
Metabolic pathways
dce01110
Biosynthesis of secondary metabolites
dce01120
Microbial metabolism in diverse environments
dce01200
Carbon metabolism
dce01212
Fatty acid metabolism
Module
dce_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
O6P33_07230 (fadB)
00650 Butanoate metabolism
O6P33_07230 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
O6P33_07230 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
O6P33_07230 (fadB)
00310 Lysine degradation
O6P33_07230 (fadB)
00380 Tryptophan metabolism
O6P33_07230 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
O6P33_07230 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
O6P33_07230 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
O6P33_07230 (fadB)
00930 Caprolactam degradation
O6P33_07230 (fadB)
Enzymes [BR:
dce01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
O6P33_07230 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
O6P33_07230 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
O6P33_07230 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
O6P33_07230 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WBE26564
UniProt:
A0AAE9VV51
LinkDB
All DBs
Position
1522981..1525128
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKTLESGIVELNFDLKGESVNKFNRLTLTELREAVDAIKANNDVKGVVVTS
GKDVFIVGADITEFVDNFKLSEEELVAGNLEVNKIFNDFEDLNVPTVVAINGIALGGGFE
MCLAADYRVMADSAKVGLPEVKLGIYPGFGGTVRLTRVVGADNAIEWIAAGKDARAEEAL
KVGAVDAVVAADKLLEASVDLAKRAISGELDYKAKRQPKLEKIKLNAIEQMMSFETAKGF
VAGKAGPNYPAPVEAIKTIQKAANHGRDKALEIEAKGFAKLAKTSVAESLIGLFLNDQAL
KRKAKVHEKIARDVKLSAVLGAGIMGGGIAYQSALKGTPILMKDIREEGIQLGLDEAAKL
LVKRLERKRIKPDAMAKALNAIRPTMSYGDFGHVDIVVEAVVENPKVKHAVLAEVEQHVG
ENTIIASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEHSSDEAVATTVA
YAQKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDQRSAVDALYEADRLGQKNGKGFYAYETDKRGKP
KKVVDDAIAEILAPIVYDKREVTDEDIINWMMIPLCMETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTEKLREMAKNGQTFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggtgaagactcttgaaagtggtatcgtcgaatta
aatttcgatctcaagggtgagtccgtcaacaagtttaatcgtctaacccttaccgagctg
cgtgaagcagtggatgcaatcaaagccaataacgatgttaaaggcgtggttgtaaccagt
ggtaaggatgtatttatcgttggtgcagacattactgagtttgttgacaactttaagctc
tctgaagaagagctggttgccggcaaccttgaagtcaataaaatcttcaatgattttgaa
gaccttaatgtgccaaccgttgttgcaattaatggcatcgctttaggcggtggttttgaa
atgtgccttgctgcggattaccgcgtcatggctgacagcgctaaagtgggtctgcctgaa
gttaagttaggtatctacccaggctttggcggcacagtacgcttaacccgtgtggttggt
gctgataatgccattgagtggatcgctgctggtaaagatgcacgcgctgaagaagcatta
aaagtgggtgctgtagatgcagtggttgcagctgataagttgctcgaagcctctgttgat
ctagctaagcgcgctatttctggcgagctggactacaaagcaaaacgtcaaccgaagcta
gaaaaaatcaaactcaacgccatcgagcaaatgatgagctttgagactgcgaaaggtttt
gttgctggtaaagcgggtccaaactacccagcccccgttgaagccattaaaacgatccaa
aaagcagccaaccatggccgtgacaaggctctagaaattgaagcgaaaggctttgctaag
ctggctaaaacttcagttgctgaaagcctaattggtctgttcttaaatgaccaagcgctt
aagcgtaaagctaaagtacacgagaaaattgcccgtgatgtgaagctgtctgcagttttg
ggtgctggtattatgggcggcggtattgcttaccagtcggctctaaaaggcacaccaatt
ctgatgaaggatatccgtgaagagggtatccagttaggtcttgatgaagctgctaagttg
ctggttaagcgtcttgagcgtaagcgcattaagcctgatgccatggctaaagcactcaat
gcaattcgcccaaccatgtcttacggtgatttcggtcatgtcgatatcgtggttgaggct
gtagttgagaatccaaaagttaagcacgcagtgctggcagaagttgagcagcatgttggt
gagaacaccattattgcttcgaatacttcaactatctcaattaacttgctggcgaaagct
ctgaagcgtccagaaaactttgtcggtatgcacttctttaacccagtgcatatgatgcct
ctggttgaagtgatccgtggtgagcactcttctgatgaagcggttgcaaccactgttgct
tatgcgcaaaaaatgggtaaaaacccaatcgtagtcaatgactgcccaggcttcttagtc
aaccgcgtattgttcccatactttggtggtttcgccaaactagtcagcgctggtgtggac
tttgttcgcattgataaagtcatggaaaaattcggctggcctatgggtcctgcttactta
atggacgtggtaggtattgataccggacaccatggtcgtgacgtaatggctgaaggcttc
ccagatcgcatgaaagatgatcaacgttcagcggttgatgcgctgtatgaagcagatcgt
ctaggtcagaaaaatggcaaaggtttctatgcttatgaaactgacaagcgcggcaagccg
aaaaaagttgtagatgatgctatcgcagaaattttagcgcctatcgtttacgacaagcgt
gaagtgactgatgaagacatcattaactggatgatgattccgttatgcatggaaactgta
cgctgtcttgaggacggtattgttgaaactgcagctgaagcagatatgggcttaatttac
ggtattggtttccctcctttccgtggtggcgcgttgcgttacatcgacagtattggtgtg
gctgaatttgttgctttggcagacaaatacgctgacttgggtgcgctatatcacccgacc
gagaaattgcgtgaaatggccaaaaacggtcaaacctttttcggttaa
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