Denitrificimonas caeni: O6P33_08265
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Entry
O6P33_08265 CDS
T08709
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dce
Denitrificimonas caeni
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dce01011
]
O6P33_08265
Enzymes [BR:
dce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
O6P33_08265
Peptidoglycan biosynthesis and degradation proteins [BR:
dce01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
O6P33_08265
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GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
EloA-BP1
Motif
Other DBs
NCBI-ProteinID:
WBE24371
UniProt:
A0AAF0AJG9
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All DBs
Position
complement(1736749..1738320)
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AA seq
523 aa
AA seq
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MPHIDRQNTSIYHFFTRTLSLGAVLFAAFLGSGCQSLNDANSNAQYESPARTVSKDAFNA
SLKRSPSWINGIDTAQDDDIWHRIRQGYQLQSYLDDNPRIDHQRLWFATRGRSIEIMSER
SSPYMYYIVESLEARNMPLELALLPMIESAYNPLAYSRSHAAGLWQFIPSTGRHFKLKQT
HWYDARRDVLASTQAALDYLEYLHNMFDGDWLLALAAYNAGEGTVGRAIKRNIARNLPTD
YWNLNLPAETQAYVPKLLAVSQLISAPDAYKIALSPIANEPYFTQIPLKQQMDITRLAKL
AKITEDDLLQLNPAYKQGITFDGPKHLLVPLDSAELLSAQLASMKPSDHIQWQQYRVRGG
DNLSSIANRNNVSIDLIKDINKLANNNLRIGQVLNIPKSSTGTRAANNLAQATHSNSSRT
VYKVRAGDNLSKIAAQQKVSVNELKRWNNLSSNALKIGQNLILISDNSSQNANSSNATVY
KVRPGDSLYAIAKRHRISLKQLKNWNPSISNALKPGQAIALYL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatattgaccgtcaaaacacctctatttatcactttttcacccgtactcttagc
ctaggcgcggtgctctttgcagcgttcttaggctcgggttgccagtctttaaatgacgca
aattccaacgcgcaatatgagtcgcccgctcgtacagtgagcaaagatgcttttaatgcc
agtttaaaacgatcaccaagctggattaacggtatcgacactgcgcaagacgatgatatt
tggcaccgcattcgccagggctatcagctgcaaagctatttggatgacaacccgcgcatt
gaccatcagcgcttatggtttgccactcgcggccgctccattgagatcatgtctgagcgc
agcagtccttacatgtactacatcgtggaaagcttagaggcgcgcaatatgcctttagag
ctggctttactgccgatgattgagagtgcctataaccctttagcatattcacgctcacat
gcggcaggtttatggcagtttattccctccaccggccgccattttaaacttaagcaaacc
cattggtatgatgcccgtcgcgatgttttagcttcaacccaagcagccctcgattacctt
gaatacctgcacaatatgtttgatggcgactggctattggccttagctgcttataacgct
ggcgaaggcaccgtaggccgagccatcaaacgcaatattgctcgcaacttacccactgat
tattggaatctaaacctgcctgccgaaactcaagcctatgtacctaagctgcttgcagtc
tcgcaactgattagcgcacctgacgcctataaaattgctctgagcccaattgcaaacgaa
ccgtacttcacacaaatcccgctcaagcagcaaatggacatcacccgtttagccaagctg
gccaaaattaccgaagatgatttactgcagctcaatcctgcctataagcagggcatcaca
tttgacggccccaaacaccttttagtcccgctagacagtgcggaactgctcagcgctcag
ctggcctcgatgaaaccaagcgatcacatccagtggcaacaataccgagtgcgcggcggc
gataatctatcgagtattgccaaccgtaataatgtttccattgacctgattaaagacatc
aacaaactcgccaataataatttacgcattggccaagtcctaaatattcctaaaagcagc
acaggcacacgggcggcaaacaatttagcccaagcaacccacagcaactccagccgcaca
gtgtataaagttcgcgctggtgacaatctatcgaaaatagctgcgcaacaaaaagtctcg
gtaaatgagctcaaacgctggaataacttaagctcaaatgcgttaaaaatagggcaaaac
ctcatccttatcagtgataacagcagccaaaacgccaattcatccaacgccactgtgtat
aaggtacgtcctggcgactcgctttatgccattgctaagcgccatagaatcagcttaaag
cagttaaaaaactggaatccaagcattagcaatgcactcaaacctggacaagctatcgca
ctctacttataa
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