Denitrificimonas caeni: O6P33_08510
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Entry
O6P33_08510 CDS
T08709
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P33_08510 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_08510 (recD)
Enzymes [BR:
dce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O6P33_08510 (recD)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O6P33_08510 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
PhoH
AAA_16
nSTAND3
DEAD
AAA_17
AAA_28
T2SSE
ATPase
AAA_25
Mg_chelatase
AAA_29
NTPase_1
ABC_tran
AAA_7
NACHT
TrwB_AAD_bind
UvrD_C
AAA_5
GvpD_P-loop
ADK
AAA_24
Motif
Other DBs
NCBI-ProteinID:
WBE24418
UniProt:
A0AAF0AKF4
LinkDB
All DBs
Position
1791521..1793656
Genome browser
AA seq
711 aa
AA seq
DB search
MIQQGELFGEEVMPVGVEQIERLTAEQALSSRDNLYLLLQDWLDAGWIRALDVALVKLLG
QLDPNAQPLALLAVALVSHQLGHGHICLDLPSVLRDPDLALLLPPEGRAVEQQPLLPSAL
LAAVSQKDWVAALQNTQLLYQQGSDASAKPLVLLSGRLYLYRYWQYESTVAQHLVQRIAT
EMPLAADFSQRLNKLFNEPLLVAGQRQTDWQKVACAMAAQGQLTLITGGPGTGKTTTVVR
LLALLQQGALQVGQALRIQLAAPTGKAAARLTESIGQQVASLPVTQSVQDAIPTAVTTLH
RLLGSLPNTRHFRHNSNNPLVVDVLVIDEASMIDLEMMHSVLQALPKHARLILLGDKDQL
ASVEAGSVLGDLCADAELAYYTTHTQQRLEQLCAEKVYAEPWCVGDAQQHRLAQRTVMLR
HSRRFGSESGIGQLARAVNQSEAQQAWQLLHSDVPDIQYLLLKQNNSAALNQLLLNVSAH
HSGALNSAGYAYYLQVLQQQRPAADKPFADPSWQQWAALVLQAFDQFRLLCALRKGEFGV
AGLNERIATALQQQGLISSAQGWYEGRPVLVTQNDYSLGLMNGDIGIALLLPNADASAEN
GEPQQVLRVVFARNDAQGGVRYILPSRLTAVETVFAMTVHKSQGSEFVHTALILPDRLNP
VLTKELLYTGITRAKNKFTLIEGHSGIFTAAVQRKVERVSGLNQAICAVGG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgattcagcaaggtgaactttttggtgaagaggtgatgcctgttggcgtcgaacaaatt
gagcgcttaactgctgagcaggccttaagcagtcgcgataatctatatctgttgttacaa
gactggctggatgccggttggatacgagcgctggatgttgctctggtaaaactgctgggc
cagcttgatccaaatgcgcagccactggcgttgctggcggtggctctggtcagccatcag
ttggggcatgggcatatttgcttagatttacccagcgttttgcgtgatccggatttagct
cttttattgccaccagaggggcgagcggttgagcagcagcctttattaccctcggcgcta
ttggccgcagtgagccagaaagactgggttgcggcattgcaaaatacgcaattactgtac
cagcagggttcggacgccagcgctaaacccttagttttattgtctggacgtctgtattta
taccgttactggcagtatgaaagcactgtagcgcaacacttggtgcaacgcattgcgact
gaaatgccgctcgccgctgatttctctcagcgcctcaacaagctgttcaatgaacccttg
cttgtcgcaggacagcgccaaacagattggcaaaaagtggcctgtgctatggccgcacaa
ggtcaactgacccttataactggcggccctggtacaggcaaaaccaccactgtggtgcgc
ttgttggcactgctgcagcaaggtgcgctacaggtaggacaggcattacgtattcagcta
gcagcgccaaccggtaaggccgcggcgcgtctgactgagtcgattggtcagcaagttgct
tcattgccggtgacacagtcagtgcaagatgcaattcccacagcggtgacgactttgcac
cggctgttgggcagtttgcctaatacccgccacttccgtcataacagcaacaacccttta
gtggttgatgtcttggtgattgacgaggcctcgatgatcgatttggaaatgatgcatagt
gtgttgcaagcattgcctaaacatgctcgtctaattttattgggggataaagatcagctc
gcctcagtagaagcaggctcggtattgggggacctctgcgctgatgctgagctggcgtat
tatactacgcacactcagcagcgccttgaacagctgtgcgcagaaaaagtgtatgccgag
ccttggtgcgtgggtgatgcacagcagcatcgtttagcacagcgtacagtgatgctgcgt
cactcacggcgatttggtagcgagtctggaatcggtcagctggcccgtgcggtcaatcaa
agtgaagcgcaacaggcttggcaactgcttcacagtgatgtgccagatattcaatacttg
ctgctcaagcaaaacaatagcgcggctctcaatcagctgctgcttaatgtctcagcgcac
cacagtggagcgctaaacagcgctggctatgcttattatttacaggttttacagcagcag
cgcccagccgcagataaaccctttgccgaccccagttggcagcaatgggctgctcttgtg
ctgcaggcctttgatcagtttcgattactgtgtgcgctgcgcaaaggtgagtttggtgtg
gccgggctcaatgagcgtattgccactgcactgcagcagcaggggcttattagtagtgcg
cagggttggtatgaaggccgtccagtattggtgactcagaacgattacagtcttggccta
atgaatggtgatataggtatcgctctcctgttgcctaatgctgacgccagcgcagagaat
ggcgagccgcagcaggtgttaagggtcgtctttgcccgcaacgatgctcaaggtggtgtg
cgttatattctgccaagtcgcttgaccgcagtagaaacagtatttgccatgacagtgcat
aaatcacaaggctctgagtttgtgcatactgctttaattttgcctgatcgccttaatccg
gttttgaccaaagagttgttgtataccggtatcactcgagcgaaaaataagttcaccttg
attgaagggcattctgggatctttaccgctgcggtacagcgcaaagttgagcgtgttagt
gggttaaatcaggctatttgtgcggtgggcggctaa
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