Denitrificimonas caeni: O6P33_08755
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Entry
O6P33_08755 CDS
T08709
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dce
Denitrificimonas caeni
Pathway
dce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O6P33_08755 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dce03400
]
O6P33_08755 (uvrB)
DNA repair and recombination proteins [BR:
dce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O6P33_08755 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O6P33_08755 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HTH_1
Viral_helicase1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WBE24464
UniProt:
A0AAE9VRK5
LinkDB
All DBs
Position
complement(1842101..1844116)
Genome browser
AA seq
671 aa
AA seq
DB search
MSRFELVTQFQPAGDQPEAIRKLVAGIESGLSHQTLHGVTGSGKTFSMANVIQQVQRPAI
VLAPNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDASINDHIEQ
MRLSATKALLERPDVIIVATVSCIYGLGSPESYLKMVVHLDRGDRIDQRTLLARLADLQY
TRNEVDFSRATFRVRGDVIDVYPAESDFEAIRVELFDDEVESISAFDPLTGKVIGKLPRF
TFYPKSHYVTPRETLLEAIEHIKVELAERLEYLRNNDQLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRDPGAPPPTLYDYLPDNALLIIDESHVSVPQIGAMYKGDRSRKENL
VNYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGHYEAEHAGQVVEQVVRPTGLIDPE
IEVRPALTQVDDLLSQISARIAVDERILVTTLTKRMSEDLTEYLGDHGVKARYLHSDIDT
VERVEIIRDLRMGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADRMTGSMERAIDETNRRREKQIAFNTEHNITPIGVKKSVKDIMEGAVV
PGARSNKRKAQARAAEQAAEYDQLHRTPSDISKRIKQLEEEMYQLARDLEFEAAAQLRDE
VQRLRLRLLEL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctttgagctcgtcacacagtttcaacccgccggtgatcagcccgaggccatc
cgcaagttggttgccggtattgagtcaggcctttcccaccaaactttacatggggtaact
ggctctggaaaaaccttcagcatggccaatgtgatccagcaagtgcagcgcccagctatt
gttctggcaccaaataaaactttggcagcgcagttgtacggagagttcaaagagtttttc
ccgaacaacgcggttgaatattttgtctcctattatgactattaccagcctgaagcttat
gtggctgcctcggacacctttattgaaaaagatgcctcgattaatgatcacattgagcaa
atgcgcttgtccgcgaccaaagcactgcttgagcgaccagacgttataattgtcgccact
gtgtcctgtatttatggtttaggtagcccagaaagttacttgaaaatggtggtgcaccta
gatcgcggcgaccgcattgatcagcgcacgctgttggcccgtttagctgatttgcaatac
acccgcaacgaagtggatttttcccgcgcgacattccgtgtgcgcggggatgtgattgat
gtgtatccagctgagtctgattttgaagccattcgggtcgagttgtttgatgatgaagtg
gaaagcatcagtgcctttgacccactgacaggtaaagttattggcaaactaccgcgtttt
actttttaccccaagtcacactatgtaacgccccgagaaacactgttagaggccattgag
catattaaagtggagcttgctgagcgcttagaatacttacgcaacaatgatcagctggtg
gaagcccagcgcttagagcagcgcacccgctttgatttggaaatgattttagagttgggg
tattgcaacggtattgaaaactattcgcgctatttgtccggtcgcgaccccggagcgccg
ccaccgactttatacgattatttgccggataacgctttactgataattgatgagtcccac
gtttcagtgccgcaaattggtgccatgtataagggggaccgttcgcgtaaagaaaactta
gtcaactatggctttcgcctgccatcggcactggataaccgtccgatgcgctttgacgag
tgggaggctgttagcccgcaaactattttcgtttcagccacgccagggcattacgaagct
gagcacgcggggcaagtggttgaacaagtggtgcgtccaaccggtttaattgacccggaa
attgaagtgcgtccagcactgacgcaagtggacgatttgctttcacagatcagcgcacgc
attgctgtggatgagcgtattttagtcaccacgcttaccaagcgcatgtccgaagatctg
accgaatacctgggtgatcacggagttaaagcccgctatttgcactcagatattgatacg
gtggaacgggtggagattatccgcgacctgcgcatgggggtgtttgatgtgttggtgggt
attaacttactgcgtgaaggcttggatatgcctgaagtttcactagtggccattcttgat
gcggataaagaaggtttcctacgctcagagcgctcactgattcaaaccattggccgcgca
gcacgtaacctaaacggtaaggctattttatatgctgaccggatgaccggctctatggag
cgcgccattgatgaaaccaaccgccgccgtgaaaaacaaattgcctttaatactgagcac
aacatcacacccatcggcgtcaagaaaagtgttaaagacattatggaaggcgctgtggtg
cccggtgcgcgcagtaataaacgtaaggctcaagcccgcgctgccgaacaagctgctgaa
tatgatcaactgcaccgtacccccagcgatatcagcaagcggatcaaacagttggaggag
gaaatgtaccagctggcccgcgacctcgagtttgaggcagcggcgcaattacgcgatgaa
gtgcaacgcctgcgtttgcgcctcttggagttgtaa
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