Denitrificimonas caeni: O6P33_09850
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Entry
O6P33_09850 CDS
T08709
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dce
Denitrificimonas caeni
Pathway
dce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
O6P33_09850 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dce03019
]
O6P33_09850 (rnc)
03009 Ribosome biogenesis [BR:
dce03009
]
O6P33_09850 (rnc)
03036 Chromosome and associated proteins [BR:
dce03036
]
O6P33_09850 (rnc)
Enzymes [BR:
dce01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
O6P33_09850 (rnc)
Messenger RNA biogenesis [BR:
dce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O6P33_09850 (rnc)
Ribosome biogenesis [BR:
dce03009
]
Eukaryotic type
90S particles
RNase
O6P33_09850 (rnc)
Prokaryotic type
rRNA processing factors
O6P33_09850 (rnc)
Chromosome and associated proteins [BR:
dce03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
O6P33_09850 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
WBE24666
UniProt:
A0AAE9VM49
LinkDB
All DBs
Position
complement(2097840..2098535)
Genome browser
AA seq
231 aa
AA seq
DB search
MSDPLLILQKKIGYTFNDSSLLTLALTHRSFAGRNNERLEFLGDAILNFVAGEALFHHFN
QAKEGQLSRLRSRLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRDSILADTTEAIIG
AIYLDSSMDVARERVLAWLEQQFSELTLVDTNKDPKTRLQEFLQSRSTELPHYEVVDIQG
EPHCRTFYVECEVSLLNEKTRGQGASRRIAEQVAATAALLALGLESNHQHD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatccattactgattttacagaaaaaaattggctacacctttaatgattcaagc
ttacttaccttagcgctgacccaccgcagttttgctgggcgcaataatgagcgcttagag
ttcttaggtgatgcaatcttgaattttgttgctggtgaggcattgtttcatcattttaac
caagccaaagaggggcagttatcacgcttgcgctcacgcttagtgaagggcgaaaccctc
gcagtgttagcccgcggctttggtcttggtgagtacttgcgtttaggttctggcgagtta
aagagcggtggttttcgccgtgattcaatccttgccgataccactgaagccattatcggc
gccatctatttagactccagcatggacgttgcccgtgagcgtgtgctggcctggcttgag
cagcagttttctgagctgactctggttgataccaataaagatccaaaaactcgactgcaa
gagttcttacaatcgcgcagcactgagctgccgcactatgaagtagtcgatattcaaggc
gaaccgcattgccgcactttttatgtggaatgcgaagtgagcttacttaatgaaaaaacc
cgaggtcagggcgccagtcgacgtattgcggagcaagtggcagcgactgcagcactgtta
gccttggggttagagagtaatcatcagcatgactga
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