Denitrificimonas caeni: O6P33_10490
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Entry
O6P33_10490 CDS
T08709
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
dce
Denitrificimonas caeni
Pathway
dce02020
Two-component system
dce02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O6P33_10490
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O6P33_10490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dce03021
]
O6P33_10490
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dce02035
]
O6P33_10490
Transcription machinery [BR:
dce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O6P33_10490
Bacterial motility proteins [BR:
dce02035
]
Flagellar system
Flagellar assembly proteins
Stator
O6P33_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
MarR_2
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
WBE24786
UniProt:
A0AAE9VMC8
LinkDB
All DBs
Position
complement(2248808..2249539)
Genome browser
AA seq
243 aa
AA seq
DB search
MTRSKGLQMYSKAQAADEQSLLIEEHAPLVKRIAYHMLGRLPASVQVEDLIQSGMIGLLE
AAKKFDASKGASFSTFVGIRIRGAMLDELRKGDWTPRSVHRNTRMVSDAVRTIEARTGQD
AKDLEVAAELNLSLDEYYAILGDTQGSRLFSFDDLLDESDHFDTHSTQQEPGRDIEKIHF
QQALAEAIAGLPERERLILSLYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLAD
WQQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatctaaaggtctgcaaatgtatagtaaggcgcaggcggctgatgagcagtca
ttgctgattgaagagcatgcgcccttagttaaacgcattgcttatcatatgcttggtcgc
ttgccggctagcgtgcaggtggaagacttaattcagtccggcatgattggtttgttagag
gcggcgaaaaagtttgatgccagtaaaggggcgagttttagcacctttgtgggcattcgc
attcgtggcgctatgctggatgagttgcgtaaaggtgattggactccgcgttcagtgcat
cgcaatacacgcatggtcagtgatgcagtgcgcaccattgaagcgcggactggccaggat
gctaaagatttagaggtggcagccgaacttaacttaagcctagatgagtattatgcgatt
ttaggcgatacccaaggcagccgtttatttagctttgatgatctactggatgaaagtgat
cactttgatacccacagcactcagcaagagcccggtcgtgatattgaaaaaatacacttc
cagcaagctctggctgaagccattgccggtttaccggagcgcgagcgtttaattttgtca
ttgtattatgatgaagaactgaacctaaaagaaattggtgaggttttaggggtcagtgaa
tcacgggtaagtcagttacacagtcagtgtgccgcacgtttaagagcgcgcttagctgac
tggcaacaataa
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