Denitrificimonas caeni: O6P33_10860
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Entry
O6P33_10860 CDS
T08709
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
dce
Denitrificimonas caeni
Pathway
dce02020
Two-component system
dce02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O6P33_10860
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O6P33_10860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dce03000
]
O6P33_10860
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dce02035
]
O6P33_10860
Transcription factors [BR:
dce03000
]
Prokaryotic type
Helix-turn-helix
Other families
O6P33_10860
Bacterial motility proteins [BR:
dce02035
]
Flagellar system
Flagellar assembly proteins
Others
O6P33_10860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
AAA
bpMoxR
nSTAND3
AAA_7
HTH_30
ATPase
Motif
Other DBs
NCBI-ProteinID:
WBE24851
UniProt:
A0AAF0AJY1
LinkDB
All DBs
Position
complement(2338659..2340113)
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AA seq
484 aa
AA seq
DB search
MWRETKILLVHDHVEQCKEFANILTFLDENYIACTSAQWRDAVATLNSSRGVLCVMLGGI
SAGKRLEALIKEFVEWDEFLPIILLEEGEAIELPSAVSASVLTRLAMPPSYSQLLGILHR
AQVYREVYDQAAERRTQREPNLFRSLVGASRCIQSVRQMMQQVADTEASVLILGESGTGK
EVIARNLHYNSERRDGPFVPINCGAIPAELLESELFGHEKGAFTGAISARAGRFELAKGG
TLFLDEVGDMPLTMQVKLLRVLQERIYERVGGNKSIDADVRIVAATHKNLEEMIELGDFR
EDLFYRLNVFPIEMPPLRERTEDIPLLINELVSRMENEKRGSVRFNEAAIMSLCQHSWPG
NVRELANLVERMAIMYPHGVIGISELPRKFRYIDEENGIQELREEVSERAALLAAVEDVP
APNPTAQLPSTGLDLREYLAELEQDLIQQALTEEDGVVARAAERLNIRRTTLVEKMRKYG
MSRS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgagaaacgaaaatcctcctggtccacgaccacgttgagcaatgcaaagagttt
gccaatatcctcacttttttagatgagaactacattgcttgcaccagcgcgcagtggcgt
gatgcagttgcaacgctaaactccagccgtggagtgttgtgtgtgatgcttggtggtatt
agcgcaggaaagcgcttagaagctttgatcaaagagtttgttgagtgggatgagttcttg
ccaattattttgctggaagagggcgaagccattgagctgcctagtgcagtatccgcctcg
gtcttaacccgcttagcaatgccgcccagttacagccagttgctgggtatcttgcaccgt
gcgcaagtttaccgtgaggtgtatgaccaagcggcagagcgccgtactcaacgtgagccc
aatttatttcgcagccttgtgggggccagtcgttgcattcaaagtgtgcggcagatgatg
cagcaagtggccgataccgaagccagtgtgctgattctcggtgaatcgggcacgggtaaa
gaagtgattgcgcgcaatttgcattacaactctgagcgccgtgatgggccctttgtgccg
attaactgtggggcaattccggcagagttattggaaagcgaattatttggccacgagaaa
ggcgcgtttaccggtgcgatcagtgcacgcgctgggcgttttgagttggctaaaggcggt
acgctgtttttagatgaagtcggcgatatgccgctaaccatgcaggttaagttgctgcgg
gtattgcaagagcgcatttatgagcgtgtgggggggaataaatccattgatgcggatgtg
cgtattgtggctgccacccataagaatcttgaagaaatgatcgagttgggcgattttcgt
gaggatttattttaccgcctcaatgtgttccccattgaaatgccaccgctgcgtgagcgc
accgaagatattccgttattgattaacgagctggtatcgcgcatggaaaatgaaaagcgt
ggctcggtgcgttttaatgaggcggcgattatgtcgttgtgtcagcacagctggccgggt
aacgtgcgcgagctggcgaaccttgttgagcgtatggcgatcatgtacccgcacggggtc
attggtatcagcgagttgccgcgtaagtttcgttacattgatgaagaaaacggaattcag
gaattacgcgaggaagtcagtgagcgtgcagcgttattggctgcagttgaggacgtccca
gcgccaaacccaaccgctcagctaccttcgacagggctggatttgcgtgaatacctggct
gagttggagcaggatttaattcagcaagcattgactgaagaagatggcgtggtggcccgc
gccgctgagcgtttaaatattcgtcgcaccaccttagtggagaaaatgcgcaaatatggc
atgagccgcagctaa
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