Denitrificimonas caeni: O6P33_12385
Help
Entry
O6P33_12385 CDS
T08709
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dce
Denitrificimonas caeni
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dce03016
]
O6P33_12385 (truB)
Enzymes [BR:
dce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
O6P33_12385 (truB)
Transfer RNA biogenesis [BR:
dce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O6P33_12385 (truB)
Prokaryotic type
O6P33_12385 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WBE25131
UniProt:
A0AAE9VN00
LinkDB
All DBs
Position
complement(2655135..2656052)
Genome browser
AA seq
305 aa
AA seq
DB search
MQQVKRKRRSVSGIIIFDKPYGVSSNGALQKVRWLLNSDKGGHTGSLDPLATGVLPLCFG
EATKFSRYLLDADKVYEATMQLGATTDTGDAEGEVLETKAVHVSAADIEAVLPQFRGDIE
QIPPMYSALKKDGQPLYKLARAGITVERPPRKVTISQLELLSCEGEQARIRVACSKGTYI
RTLVEDIGAVLGCGAHVAQLRRTEAGPFDLTHAVTLAELERLHEEGGAEALDACMIPMDS
GLLHFPRVSLTENSSFFWLNGQPVRAQNSPLEGMVRVYNHNDEFIGVGEIDDDAMVAPKR
LIRSQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacaggttaaacgtaagcgtcgcagtgtcagcggtattattatttttgataagcct
tatggtgttagctctaacggtgctttgcagaaagttcgttggctgctcaactccgataaa
ggcggccacactggtagcctcgatcctttagcaacgggtgtattgccgctgtgctttggt
gaggcaactaagttttctcgctacctgctggatgctgataaagtttatgaagcaaccatg
cagcttggcgccaccaccgataccggtgatgctgagggtgaggtactagaaactaaagca
gtccatgtcagcgctgctgatattgaagcggtattgccgcagtttcgtggcgatattgaa
caaattccaccgatgtattcagcacttaaaaaagatgggcaaccgctgtataagcttgcg
cgtgctggtattactgtggagcgtccgccgcgtaaagtgactatcagtcagcttgagctt
ttatcctgcgaaggggagcaagctcgtattcgagtggcctgcagcaaaggcacttatatc
cgcaccttagttgaagacattggtgcggtgctgggctgtggtgcccatgtggcgcaattg
cgtcgcacagaggctgggccttttgatttaacccatgcggtcactttagcagagctggag
cgcttgcatgaggaaggtggtgctgaagcactggatgcctgcatgattcccatggacagc
ggtttgctgcattttcctcgagtcagtttgacggagaacagcagtttcttttggttaaat
ggccagcccgtacgtgcgcagaattcgccgctggaaggaatggtgcgggtttataaccat
aatgatgaatttatcggcgtgggcgaaatagatgatgatgcaatggttgcacccaagcgt
ctaattcggtcacaatga
DBGET
integrated database retrieval system
