Denitrificimonas caeni: O6P33_12770
Help
Entry
O6P33_12770 CDS
T08709
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dce
Denitrificimonas caeni
Pathway
dce00521
Streptomycin biosynthesis
dce00523
Polyketide sugar unit biosynthesis
dce00525
Acarbose and validamycin biosynthesis
dce00541
Biosynthesis of various nucleotide sugars
dce01100
Metabolic pathways
dce01110
Biosynthesis of secondary metabolites
dce01250
Biosynthesis of nucleotide sugars
Module
dce_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O6P33_12770 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
O6P33_12770 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
O6P33_12770 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
O6P33_12770 (rfbB)
00525 Acarbose and validamycin biosynthesis
O6P33_12770 (rfbB)
Enzymes [BR:
dce01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
O6P33_12770 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
NAD_binding_10
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
WBE25202
UniProt:
A0AAE9VPM2
LinkDB
All DBs
Position
2749894..2751003
Genome browser
AA seq
369 aa
AA seq
DB search
MKLLLTGGAGFIGSAVIRHILAHSQDSIVNLDKLTYAGNLESLTEVSDNPRYSFVQADIC
DPAALQQIFAKHQPDAVMHLAAESHVDRSIDGPAEFITTNIVGTYQLLEAARFYWQQLDS
QRQQAFRFHHISTDEVYGDLPHPNDSQAAASQLFTETTAYAPSSPYSASKASSDHLVRAW
QRTYGLPVLLSNCSNNYGPYQFPEKLIPLVILNALKGKPIPIYGSGDQIRDWLYVADHAH
ALYTVLRTGKVGETYNIGGHNEKQNIEVVRSICTLLDELAPAAQRKLTAADGSTLTSYSS
LISHVSDRPGHDRRYAIDASKIQHELGWVPAHTFASGLRKTVQWYLDNPTWCQRVQDGSY
QGERLGVQQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttactaactggcggtgctggttttattggctcggcagtaatccgccatatt
ctcgcgcacagccaggattcaatcgtcaaccttgataaacttacttatgcgggcaatctt
gagtcactcaccgaggtcagtgacaaccctcgctatagctttgtccaagcggatatttgt
gaccctgcggcactgcagcaaatctttgccaagcatcagcccgatgcggtgatgcactta
gctgccgagtcacacgttgaccgctccattgacggcccagcagagtttattacaaccaat
attgtcggcacctatcagctattagaggctgcacgcttttattggcaacaactggatagc
cagcgccaacaagcctttcgctttcatcatatttcaactgatgaggtctatggcgacttg
cctcaccctaacgacagccaagcagccgcttcgcagctgttcaccgaaacaaccgcctac
gcacccagctcaccctatagcgccagtaaagccagctctgatcatttagtccgtgcttgg
cagcgtacttacggcttaccggtactgctcagcaactgttcaaataactatgggccttac
cagttcccagaaaagctgattcctttggtaattctaaatgctctaaaaggaaagcctata
ccgatttacggcagcggcgatcaaattcgcgactggctttatgtagccgatcatgcgcat
gcactctacactgtactgcgcaccggcaaagttggcgagacctacaatattggcggccat
aatgaaaaacaaaacattgaggtcgtccgcagcatttgcacgctacttgacgagctggcc
ccagctgcacagcgcaagctaacggctgccgacggctcaacattaaccagctacagcagc
ctaatcagccatgttagcgaccgcccagggcatgatcgccgctatgccattgatgccagt
aaaattcaacatgaactgggctgggtgcctgcccacacctttgcatcaggcttaagaaaa
accgtgcaatggtatctcgataacccgacctggtgtcagcgggtgcaagacggtagctac
caaggtgaacgcctaggagtacaacaatga
DBGET
integrated database retrieval system