Denitrificimonas caeni: O6P33_12930
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Entry
O6P33_12930 CDS
T08709
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dce
Denitrificimonas caeni
Pathway
dce00470
D-Amino acid metabolism
dce00550
Peptidoglycan biosynthesis
dce01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dce00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O6P33_12930 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
O6P33_12930 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dce01011
]
O6P33_12930 (murD)
Enzymes [BR:
dce01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
O6P33_12930 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dce01011
]
Precursor biosynthesis
Amino acid ligase
O6P33_12930 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WBE26624
UniProt:
A0AAE9VV89
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All DBs
Position
complement(2785000..2786286)
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AA seq
428 aa
AA seq
DB search
MSLVRFLARHGQAFAVADSRETPPELSTLQREYPQVSVHCGPLSAAQLSAAQVLYVSPGL
ALSTPALQAAIAQGVSISGDIDLFAQYARAPIVAITGSNAKSTVTTLVGQMFAAAGLKVA
IGGNLGVPALDLLDDAVDVYVMELSSFQLETTTHLQARVAVCLNISEDHMDRYDDLQDYI
AAKQRVFNAAQALVVNRDDLLSQPQQAHTSVISFGLSQPAAGEFGLREHQGETYLAYGNE
LLLAVSRLKVRGSHNYANALAALAIGASMALPMAAMLTALQAFAGLEHRCQWLRTRHGVD
WYNDSKATNVGAALAAIEGLGADSSGKLVLIAGGDGKGADFSSLQAPVAQYCRAVIVLGR
DAEQVAQALAAAVPIERVSSLTAAVQLAAQLAQAGDSVLLAPACASLDMFKSFEERGEKF
AQALEELP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtgcgttttttagcgcgccacgggcaggcttttgccgttgctgacagccgt
gagacaccaccagagctcagtaccttgcagcgcgagtacccgcaggtgagtgtgcattgt
ggtccattgtcggcagcacagttaagtgccgcgcaggtgttatacgtcagtcctggttta
gccttaagtacaccggcactgcaggcggcaatcgcgcaaggcgtcagcatctctggggac
attgatttgtttgctcaatatgcccgtgcacccattgtggcgattaccggctctaatgcg
aaaagtactgtcaccactttagtggggcagatgtttgctgcagccggtctcaaggtcgcc
attggcggtaacttaggcgtaccagcgcttgacctgctggatgatgcggtggatgtgtat
gtgatggagttatccagctttcagttggaaaccaccactcatctgcaagcgcgtgtcgct
gtgtgtttaaacatcagtgaagatcatatggatcgctatgacgatctgcaggattatatt
gctgctaaacagcgagtgtttaacgctgcccaggcgctggtagtaaaccgtgatgatctg
ctctcgcagcctcagcaagcgcatactagcgtcattagttttggcctgtcgcaaccggcg
gcgggagagtttggcttacgtgagcaccaaggtgaaacctatttagcttatgggaatgaa
ctgctcttagcggtgagtcgtttaaaagttcgtggcagccacaactatgccaatgctctg
gccgctttggccattggcgcatctatggcactgcccatggcggccatgttgacggcgctg
caggcgtttgcagggcttgagcaccgatgccagtggctgcgcactaggcatggcgtggat
tggtataacgactccaaagccactaatgtcggtgcggcattagcggccattgaagggctc
ggagctgatagctcgggcaagctggtattgattgctggtggcgatggcaagggcgcagac
ttttccagcctgcaggcacctgtagcgcagtattgccgtgcggtgattgttttggggcgt
gatgccgagcaggttgcacaagctttggctgcagctgtgccgattgagcgagtcagcagc
ctgactgcagcagtgcagttggccgcgcaattagcacaagcaggcgatagcgttttgttg
gcgccggcttgcgccagtctggatatgttcaaaagctttgaagagcgtggtgaaaaattt
gcgcaagcgcttgaggagttgccatga
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