Denitrificimonas caeni: O6P33_13020 Help Entry O6P33_13020       CDS       T08709                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism dce  Denitrificimonas caeni Pathway dce02020   Two-component system dce02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:dce00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     O6P33_13020  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     O6P33_13020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:dce03021]     O6P33_13020 Transcription machinery [BR:dce03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      O6P33_13020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID DUF3570 HTH_21 HTH_IclR HTH_31 Motif Other DBs NCBI-ProteinID:  WBE25246 UniProt:  A0AAE9VUQ7 LinkDB All DBs Position 2802051..2803556 Genome browser AA seq 501 aa AA seqDB search MKASLVLKMGQQLSMTPQLQQAIRLLQMSTLDLQEEIQEALESNPMLELEEDGTSVQSDP DAAKKSASDESTAPQENSQSTDTAAAAEQPATQSDDWPEQIPSELEIDTSWDDIYQSSAS SNIPSSNSEEWDFTSTTSVGVDLQSHLLWQLNLAKMTETDRTIATVIIDSIGEDGYLQES LEEIQSSFDPMQHIEMDEVEMVLKRVQQFEPTGIAARDLSECLLLQLHSLPSDTAWLAQA QQLCAEHLELLGARDYNQIMRRMRIKEDALKNIVQLIQTLNPRPGSVIESKEPEYIVPDV IVRKANNRWIVELNPEIAPRLAVNAHYASFVRRADNSADNTFLRTQLQEARWFIKSLQSR NETLLKVATEILDYQRGFFDYGPEAMKPLVLAEVAEAVGMHESTISRVTTQKYMHTPRGI FELKYFFSSHVSTTQGGECSSTAIRAIIEKIVAAENPRKPLSDSKIAGLLEEQGIQVARR TIAKYREALGIASSTDRKQLL NT seq 1506 nt NT seq  +upstreamnt  +downstreamnt atgaaagcctcactcgtattaaaaatgggccaacagctgtccatgaccccgcaattgcag caagcaattcgcttactgcaaatgtcgaccctggacctacaagaagaaatccaagaggcc ctagaaagtaatcctatgcttgaactggaagaggatggcacctctgttcagagcgatcct gatgctgccaaaaaatcagccagcgatgaatctaccgccccgcaagaaaacagtcagagc acagacaccgctgctgcggctgaacagcctgctacgcaaagcgacgattggccggaacaa attcccagcgagctcgaaatcgacacctcatgggatgacatctaccaatccagcgccagc agtaacattcctagctccaatagcgaagagtgggactttaccagcaccacatcggtcggt gtcgacctgcaaagccacctgctgtggcagctcaacctcgctaaaatgaccgagactgat cgcaccatcgccaccgtaatcatcgacagcattggcgaggacggttacctacaagaaagc ctagaggaaatccaaagctcctttgacccgatgcaacacattgaaatggatgaagtggaa atggtcctcaagcgggtgcagcagttcgagcccacaggcattgctgcccgcgaccttagc gagtgcctgctactgcaactgcacagcttgcccagtgacacagcatggcttgcacaagcg caacagctctgtgctgagcacttagagctgctcggcgcccgtgactacaatcaaattatg cggcgcatgcgcatcaaagaagacgcactaaaaaacattgtgcaattgattcaaaccctc aacccgcgcccaggctcagtgattgaaagcaaagaacctgaatacatagtgcccgatgtt attgtgcgcaaagccaacaaccgttggattgttgagctcaaccctgaaattgcccctcgt ctggcggttaacgcccattacgccagttttgtacgccgcgccgacaacagcgctgacaac acatttttacgtacgcagctgcaagaagcgcgctggtttattaaaagcttacaaagccgc aatgaaaccttactcaaagtcgcaacggaaattcttgattaccaacggggtttctttgac tatggccctgaagccatgaaacccttggtactggctgaagtagccgaggcagtgggcatg catgagtcaaccatttcgcgggtaacaacacaaaaatacatgcatacgccacggggcata ttcgagctgaagtattttttctccagccacgtcagcaccacacaaggcggcgaatgctca tccacggctattcgcgccattatcgaaaagatcgtagcagcagaaaacccaagaaaacca ttgagtgacagtaaaatcgctggtttactggaagagcaaggtattcaagtggcacgtcgc accattgccaagtaccgtgaagcacttggcattgcctcttcaaccgatcggaaacaactc ttatag

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