Deinococcus soli (ex Cha et al. 2016): SY84_00165
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Entry
SY84_00165 CDS
T04233
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Pathway
dch00230
Purine metabolism
dch00240
Pyrimidine metabolism
dch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SY84_00165 (cpdB)
00240 Pyrimidine metabolism
SY84_00165 (cpdB)
Enzymes [BR:
dch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SY84_00165 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SY84_00165 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Lsr2
Motif
Other DBs
NCBI-ProteinID:
AKH18226
UniProt:
A0A0F7JP55
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All DBs
Position
31615..33489
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AA seq
624 aa
AA seq
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MTALMLGAAGAQTVELRILETTDLHTAAKGYDYYQDKPTGEFGLEYTATLIAKARAEKVN
TLLFDNGDLIQGNPLGDYAARVAPIKDGELHPMHQAMRSLKYDGATLGNHEFNYGLDYLD
RVLKSAPMPYVNANVLNMDGSNKYTPYVIQRKLVRDTQGRPYYINVGVIGFTPPQIVNWD
KAYLDGKVQVMDIVQSAQKFVPDMKARGADIIVALAHTGINSGAYTPGQEQAGAELTKVP
GLDVILTGHSHLEFPGPAYKDVPGVNLAKGTINGKVVLMPGFWGNNLGVADLKLNFDRKT
QKWTILDAQGGIRPIWDKTAKKSLVTADATVAAAVEGAHQGTLGYVRGKVADLTAPINSY
WALTQDDPSVQLVSNAQIAYVKAALSSTQYKDLPVLSAAAPFKAGGRAGVSYYTDIPAGT
LAIKNVADLYVYPNTVQAVLVTGAQVQEWLERSAGQFKQIDPSKAEPQALVDETFPTYNF
DVIDGVSYEIDVTQPNRYNSRGEVVNPNARRIKNLTFMGKPIDPAAQFVVATNNYRASGG
GSFPGLNGKNIILQAPDETREALVKYFNEQKTVNPSADGNWKLTPIPGATLLYASSPTAQ
KYAPANATLVKTRDDGFAEYYIKY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctcatgctcggcgctgcgggcgcgcagactgtcgaactgcgcatcctcgaa
accaccgaccttcacaccgccgccaagggctatgactactaccaggacaagcccaccggc
gagttcggcctggagtacaccgccacgctgattgccaaggcccgcgccgagaaggtcaac
acgctgctgttcgacaacggcgacctgatccagggcaacccgctcggcgactacgccgcg
cgcgtcgcgcccatcaaggacggcgaactgcaccccatgcaccaggccatgcgctccctg
aaatacgacggtgccaccctgggcaaccacgaattcaactacggcctggactacctcgac
cgcgtgctgaagtccgcgcccatgccgtacgtgaacgccaacgtcctgaacatggacggc
agtaacaaatacaccccctacgtcatccagcgcaaactggtccgtgacacgcagggccgc
ccgtactacatcaacgtcggcgtgatcggcttcacgcccccccagatcgtcaactgggac
aaggcgtacctcgacggcaaggtgcaggtcatggacatcgtccagagcgcccagaagttc
gtgcctgacatgaaagccaggggcgcggacatcatcgtcgcgctggcccacaccggcatc
aacagcggcgcgtacacccccggccaggaacaggccggtgcggaactcaccaaggtcccc
ggcctggacgtgatcctgaccgggcacagccacctggaattccccggcccggcctacaag
gacgtccccggcgtgaacctcgccaagggcaccatcaacggcaaggtcgtcctgatgccc
ggcttctggggcaacaacctcggcgtcgccgacctgaaactgaacttcgaccgcaagacc
cagaagtggaccatcctggacgcgcagggcggcatccgccccatctgggacaagaccgcc
aagaagagcctcgtgaccgccgacgcgaccgtcgccgccgccgtcgagggcgcgcaccag
ggcaccctgggctacgtgcgcggcaaggtcgccgacctgaccgcccccatcaactcctac
tgggccctgacgcaggacgaccccagcgtgcagctcgtcagcaacgcgcagatcgcgtac
gtgaaggccgcgctgagcagcacccagtacaaggacctgcccgtcctctccgccgcggcg
cccttcaaggccgggggccgcgcgggcgtcagctactacaccgacattcccgccgggacg
ctggcgatcaagaacgtcgccgacctgtacgtgtacccgaacaccgtgcaggccgtgctc
gtgaccggcgcgcaggtgcaggagtggctggaacgcagcgccgggcagttcaagcagatc
gaccccagcaaggctgaaccccaggcgctggtggacgagaccttccccacctacaacttc
gacgtgatcgacggcgtgagctacgagatcgacgtgacccagcccaaccgatacaacagc
agaggcgaggtcgtgaacccgaacgcccgccgcatcaagaacctgacgttcatgggcaaa
cccatcgacccggccgcgcagttcgtggtcgccacgaacaactaccgcgcctcgggcggc
ggctcgttccccggcctgaacggcaagaacatcatcctgcaggcacccgacgagacccgc
gaggccctcgtgaagtacttcaacgagcagaagaccgtcaaccccagcgctgacggcaac
tggaagctcacgcctatccccggcgcgaccctgctgtacgccagcagccccaccgcccag
aagtacgcgcccgcgaacgccacgctggtcaagacccgcgacgacggtttcgccgagtac
tacatcaagtactga
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