Deinococcus soli (ex Cha et al. 2016): SY84_01165
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Entry
SY84_01165 CDS
T04233
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Pathway
dch03420
Nucleotide excision repair
dch03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SY84_01165
03430 Mismatch repair
SY84_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dch03400
]
SY84_01165
Enzymes [BR:
dch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SY84_01165
DNA repair and recombination proteins [BR:
dch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SY84_01165
MMR (mismatch excision repair)
Other MMR factors
SY84_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Costars
DUF4566
Motif
Other DBs
NCBI-ProteinID:
AKH15881
UniProt:
A0A0F7JIM6
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All DBs
Position
complement(235356..237572)
Genome browser
AA seq
738 aa
AA seq
DB search
MTAPDLLAQLNPTQAQAADHYTGPALVIAGAGSGKTRTLIYRIAHLIGHYGVQPGEILAV
TFTNKAAAEMRERASHLIGGADKLWMSTFHSAGVRILRAYGEHIGLRRGFVIYDDDDQLD
ILKEVMGSVPGIGPDTNPRVLRGILDRAKSNLLTPEDLSRSGEPYISGVPREAAAEVYRR
YEQRKKGQNAIDFGDLITETVRLFQEVPAVLNAVQNRAKFIHVDEYQDTNKAQYELTRLL
ASRDRNLLVVGDPDQSIYKFRGADIQNILDFQKDYRDAKVYLLEHNYRSSARVLTIANKL
IENNAERLDKTLKAVKEDGHPVVFHRAGDHRAEGDFVAEWITRLHTLEGRRFSEMAILYR
TNAQSRVLEESLRRVQIPAKIVGGVGFYDRREIKDILAYARLAINPSDDVALRRIIGRPK
RGIGDTALVKLMDWARANGTSLLTACANAEQARILDRGAQRPVEFAALMEAMADAAENYE
PAPFLRFVIETSGYLDLLRQEGQEGQVRMENLDELINAAQEWAQEHEGTIADFLDDAALL
SSVDDMRTKTENKGSPEDAVTLMTMHNAKGLEFPVVFIVGTEEGLLPSKGALVEAGGIEE
ERRLFYVGITRAMERLFLTAAQNRMQFGKTNAAEDSRFLEEIEGHFDTIDPYGQVIEYRA
KTWKQYRPTVPAPNVVKNTSPMTAGMAFRGGEKVKHPKFGEGQVLAVAGVGDRQEVTVHF
PSAGTKKLLVKFANLSPA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccgacctccttgcccagctcaaccccacccaggcccaggccgccgaccac
tacaccggcccggccctggtcatcgccggtgccggcagcggcaagacccgcaccctcatc
taccgcatcgcgcacctgatcggccactacggcgtgcagcccggcgagatcctcgccgtg
accttcacgaacaaggccgccgccgagatgcgcgaacgtgccagccacctcatcggcggc
gcggacaaactgtggatgagcaccttccacagcgccggcgtgcgcatcctgcgcgcctac
ggcgaacacatcggcctccggcgcggcttcgtcatctacgacgacgacgaccagctcgac
atcctcaaggaagtcatgggcagcgtccccggcatcggccccgacaccaacccccgcgtg
ctgcgcggcattctcgaccgcgccaagagcaacctcctgacccccgaggacctctcccgc
agcggcgagccttacatcagcggcgtgccccgcgaggccgccgccgaggtctaccgccgc
tacgaacagcgcaagaagggccagaacgccatcgacttcggcgacctgatcaccgagacc
gtccgcctcttccaggaggtgccggccgtgctgaacgccgtgcagaaccgcgcgaagttc
atccacgtggacgagtaccaggacaccaacaaggcccagtacgaactcacccgcctgctc
gccagccgcgaccgcaacctcctcgtcgtgggcgaccccgaccagagcatctacaagttc
cgcggggcggacatccagaacatcctggacttccagaaggactaccgcgacgcgaaggtg
tacctgctggaacacaactaccgctccagcgcccgcgtgctgaccatcgccaacaagctg
atcgagaacaacgccgagcgcctcgacaagaccctcaaggccgtcaaggaggacgggcac
ccggtcgtgttccaccgcgctggcgaccaccgcgcggagggggacttcgtggcggagtgg
atcacgcgcctgcacaccctggagggccgccgcttcagcgagatggcgatcctgtaccgc
acgaacgcgcagtcgcgcgtgctggaggaatcgctgcggcgcgtgcagattcccgcgaag
atcgtgggcggcgtgggcttctacgaccgccgcgagatcaaggacatcctcgcgtacgcc
cggctggccatcaacccgagtgacgacgtggccctgcgccgcatcatcgggcggcccaag
cgcgggatcggcgacacggccctggtgaaactgatggactgggcccgcgcgaacggcacc
agcctcctgaccgcctgcgcgaacgccgagcaggcccgtatcctcgaccgcggcgcgcag
cggcccgtggagttcgccgcgctgatggaagccatggcggacgccgccgagaactacgaa
cccgccccgttcctgcgcttcgtgatcgaaaccagcgggtaccttgacctgctgcgccag
gaggggcaggagggccaggtacgcatggagaacctggacgaactcatcaacgccgcgcag
gaatgggcgcaggaacacgagggcaccatcgcggacttcctggacgacgcggcgctgctg
tccagcgtggacgacatgcgcaccaagaccgagaacaaggggtccccggaggacgccgtc
accctgatgaccatgcacaacgccaagggcctggaattccccgtggtgttcatcgtgggt
accgaggagggcctgctgcccagcaagggcgccctggtcgaggccggggggatcgaggag
gaacgccgcctgttctacgtgggcatcacccgcgccatggaacgcctgttcctgaccgcc
gcgcagaaccgcatgcagttcggcaagacgaacgccgccgaggacagccgcttcctggag
gagatcgagggccacttcgacaccatcgacccgtacgggcaggtcatcgagtaccgcgcc
aagacctggaaacagtaccggccgaccgtgcctgcccccaatgtcgtcaagaacaccagc
cccatgaccgccgggatggccttccggggcggcgagaaggtgaaacaccccaagttcggt
gaggggcaggtgctggccgtggcgggtgtgggcgaccggcaggaggtcaccgtgcacttc
ccgtccgcaggcaccaagaagctgctcgtgaagttcgcgaacctcagccccgcctga
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