Deinococcus soli (ex Cha et al. 2016): SY84_04205
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Entry
SY84_04205 CDS
T04233
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dch03016
]
SY84_04205
Enzymes [BR:
dch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SY84_04205
Transfer RNA biogenesis [BR:
dch03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SY84_04205
Prokaryotic type
SY84_04205
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AKH16383
UniProt:
A0A0F7JNG7
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Position
851982..852974
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AA seq
330 aa
AA seq
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MLRARVLGGPAEDNALWVVADSGQGQTRLLLDCGARVLDTLPFAEVQATDHLLLSHLHMD
HVGGFDDFFRATFDRPAPTHAWGPPGTARILGHRFQGFWWNHAPELRGQWVVHDVHDTHV
QAFRFEAQEAFAVAHDAGSRPHDGTILTTPEVSVQAIPLEHHGRSLGFVLREPDRERVNT
AALAGLGLRPGPWLAALKGGATGELEVNGQPHDAAGLRAALMARETGESLAYLTDFLLGA
AQQARLAPLLRGVQTLYAEAQYAPEDHDLAARHEHTTVTQVAALAHAAGVPALTLLHLSR
RYRPEQWSAMLSAAQAIHPATRFPDGWLDA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttgagggcacgggtgctgggcgggccggcagaggacaacgcgctgtgggtcgtggcg
gacagcgggcaggggcagacgcgcctgctgctggactgcggcgcgcgcgtgctggacacg
ctgccgttcgcggaggtgcaggccaccgatcacctgctgctgtcgcacctgcacatggat
cacgtgggcggcttcgacgacttcttccgcgccaccttcgaccggcccgcgcccacgcac
gcctgggggccgcccggcacggcccgcatcctcgggcaccgcttccaggggttctggtgg
aaccacgcgcccgagctgcgcgggcagtgggtggtgcatgacgtgcacgacacgcacgtg
caggccttccgcttcgaggcacaggaggccttcgccgtggcgcacgacgcgggcagtcgc
ccgcacgacggcaccatcctcaccaccccggaagtcagcgtgcaggccattccactggaa
caccacggccgtagcctgggtttcgtcctgcgggaacccgaccgggaacgcgtgaacacc
gccgccctggcgggactgggcctgcgccccggcccctggctggctgcattgaaaggcggc
gcgaccggcgaactggaggtgaacggccagccgcacgacgccgctggcctccgcgccgca
ctgatggcccgcgagaccggggagagcctcgcgtacctcacggacttcctgctgggcgcc
gcgcagcaggcccgcctcgctcccctcctgcgcggcgtgcagacgctgtacgccgaggcg
cagtacgcccccgaggaccacgacctcgccgcccggcacgagcacaccaccgtcacgcag
gtcgccgccctggcccacgcggcgggcgtgcccgcgctgacgctgctacacctgagccgc
cgctaccgacccgaacagtggtccgccatgctgagtgccgcgcaggccatccaccccgcc
acgcgtttcccggacggctggctggacgcgtga
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