KEGG   Deinococcus soli (ex Cha et al. 2016): SY84_08550
Entry
SY84_08550        CDS       T04233                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
dch  Deinococcus soli (ex Cha et al. 2016)
Brite
KEGG Orthology (KO) [BR:dch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dch03032]
    SY84_08550
   03036 Chromosome and associated proteins [BR:dch03036]
    SY84_08550
   03400 DNA repair and recombination proteins [BR:dch03400]
    SY84_08550
DNA replication proteins [BR:dch03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SY84_08550
Chromosome and associated proteins [BR:dch03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SY84_08550
DNA repair and recombination proteins [BR:dch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SY84_08550
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF7566 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AKH17097
UniProt: A0A0F7JN46
LinkDB
Position
complement(1731213..1731569)
AA seq 118 aa
MAKSTKPAAKKPAPKKGAAKPAPKAEAGKIAKTQIIDMVADKTTLNKKQAGDAVATVIDC
IVDALRGGSSVGLPGLGTLSVTHTAERTGVKPGTSERITIPAGKKVRFKVATTLKGTL
NT seq 357 nt   +upstreamnt  +downstreamnt
atggccaagagcaccaaacccgccgcgaagaaacccgcccccaagaaaggcgcggcgaaa
cccgccccgaaagccgaggccgggaagatcgccaagacgcagatcatcgacatggtcgcc
gacaagaccaccctgaacaagaagcaggccggggacgccgtcgcgaccgtcatcgactgc
atcgtcgacgccctgcgcggcggcagcagcgtcggcctgcccggcctgggcaccctgagc
gtcacccacaccgccgagcgcaccggcgtcaaacccggcaccagcgaacgcatcaccatc
cccgccgggaagaaggtgcgcttcaaggtcgccacgaccctcaaaggcaccctctaa

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