Deinococcus soli (ex Cha et al. 2016): SY84_08550
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Entry
SY84_08550 CDS
T04233
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dch03032
]
SY84_08550
03036 Chromosome and associated proteins [BR:
dch03036
]
SY84_08550
03400 DNA repair and recombination proteins [BR:
dch03400
]
SY84_08550
DNA replication proteins [BR:
dch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SY84_08550
Chromosome and associated proteins [BR:
dch03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SY84_08550
DNA repair and recombination proteins [BR:
dch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SY84_08550
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF7566
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AKH17097
UniProt:
A0A0F7JN46
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All DBs
Position
complement(1731213..1731569)
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AA seq
118 aa
AA seq
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MAKSTKPAAKKPAPKKGAAKPAPKAEAGKIAKTQIIDMVADKTTLNKKQAGDAVATVIDC
IVDALRGGSSVGLPGLGTLSVTHTAERTGVKPGTSERITIPAGKKVRFKVATTLKGTL
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagcaccaaacccgccgcgaagaaacccgcccccaagaaaggcgcggcgaaa
cccgccccgaaagccgaggccgggaagatcgccaagacgcagatcatcgacatggtcgcc
gacaagaccaccctgaacaagaagcaggccggggacgccgtcgcgaccgtcatcgactgc
atcgtcgacgccctgcgcggcggcagcagcgtcggcctgcccggcctgggcaccctgagc
gtcacccacaccgccgagcgcaccggcgtcaaacccggcaccagcgaacgcatcaccatc
cccgccgggaagaaggtgcgcttcaaggtcgccacgaccctcaaaggcaccctctaa
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