Deinococcus soli (ex Cha et al. 2016): SY84_08690
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Entry
SY84_08690 CDS
T04233
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dch03016
]
SY84_08690
Enzymes [BR:
dch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SY84_08690
Transfer RNA biogenesis [BR:
dch03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SY84_08690
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GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AKH17117
UniProt:
A0A0F7JN54
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All DBs
Position
1755753..1757141
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AA seq
462 aa
AA seq
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MTLPDLTPAQRTELELLARGKQDKSRTMRDLKQPETPEAAHALLLRAGLWTDARTPYADR
LGAALNPVTLDVPPFTPEQRLDLTHLDVYAIDDEGNRDPDDAVGIEALPGGLTRLWVHVA
DVAALAPADSPLDLEARARGATLYLPDRTIGMLPDALVEQAGLGLHDTSPALSISLDLDE
DGNADAVDVQLTTVRVQRLTYTQAQERLDAGQEPFVTLARLAAASRELRVQEGALSIDLP
EVRVKADEAGATVTPLPKPEMRVVVQECMTLAGWGAAIYADDHAIALPFATQDPPHREVR
GDTLPAQWARRRTLARTRFQPAPGPHAGMGLDLYTQATSPMRRYLDLVVHQQLRAHLAGQ
DGLSGKEVAARVAQAQMNADATRQAERLSRRHHTLRFIAAQPERAWEAVVVERRGPQATL
LIPDLAFDLPLSTPAAPGTALRVRLGDVNLPNLTLRARVVTD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcccgacctcacgcccgcgcagcgcaccgagctggaactgctcgcccgcggc
aaacaggacaagagccgcaccatgcgcgacctgaagcaacccgagacgcccgaggccgcg
cacgccctgctgctgcgcgccggactgtggaccgacgcccgcacgccctacgccgaccga
ctgggcgccgccctgaatcccgtcacgctggacgtgccgcccttcacgcccgaacagcgg
ctggacctgactcacctggacgtgtacgccatcgacgacgagggcaaccgcgacccggac
gacgccgtgggcatcgaggcgctgcccggcggcctgacccgcctgtgggtgcacgtcgcg
gacgtcgccgcgctggcccctgccgacagcccgctggacctagaggcccgcgcgcgcggc
gcgaccctgtacctcccggaccgcaccatcggcatgctgcccgacgcgctggtcgagcag
gcgggcctggggctgcacgacaccagccccgcgctgagcatcagcctggacctcgacgag
gacggcaacgccgacgccgtggacgtgcaactgacgaccgtgcgcgtgcagcgcctgacg
tacacgcaggcgcaggagcggctggacgcaggtcaggagccgttcgtgacgctggcccgc
ctggccgccgcgagccgcgagctgcgcgtgcaggagggcgccctgagcatcgacctgccc
gaggtccgcgtgaaggccgacgaggcaggcgcgaccgtcacgcccctgcccaagcccgag
atgcgggtggtggtgcaggaatgcatgacgctggccgggtggggcgccgcgatctacgcg
gacgaccacgccattgccctgccgttcgccacgcaggacccgccccaccgcgaggtgcgc
ggcgacacgctgcccgcccagtgggcgcggcggcgcacgctggcccgcacccgcttccag
cccgcgccgggaccgcacgccgggatgggcctggacctgtacacgcaggcgaccagcccc
atgcgccgctacctggacctggtggtgcaccagcagctgcgcgcccatctggccgggcag
gacggcctgagcggcaaggaggtggcggcgcgcgtggcgcaggcgcagatgaacgcggac
gccacccggcaggccgagcgcctgagccgcaggcatcacaccctgcgcttcatcgccgcg
cagcccgagcgggcttgggaggcggtcgtggtggagcgccggggaccgcaggcaacgctg
ctgatcccggatctggccttcgacctgccgctgagcacgcccgccgcgcccggcacggcg
ctgcgcgtgcggctgggcgacgtgaacctgccgaacctgacgctgcgcgcgcgggtcgtc
acggactga
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