Deinococcus soli (ex Cha et al. 2016): SY84_10235
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Entry
SY84_10235 CDS
T04233
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Pathway
dch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SY84_10235 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dch03019
]
SY84_10235 (groEL)
03110 Chaperones and folding catalysts [BR:
dch03110
]
SY84_10235 (groEL)
03029 Mitochondrial biogenesis [BR:
dch03029
]
SY84_10235 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dch04147
]
SY84_10235 (groEL)
Enzymes [BR:
dch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SY84_10235 (groEL)
Messenger RNA biogenesis [BR:
dch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SY84_10235 (groEL)
Chaperones and folding catalysts [BR:
dch03110
]
Heat shock proteins
HSP60 / Chaperonin
SY84_10235 (groEL)
Mitochondrial biogenesis [BR:
dch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SY84_10235 (groEL)
Exosome [BR:
dch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SY84_10235 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SY84_10235 (groEL)
Exosomal proteins of breast cancer cells
SY84_10235 (groEL)
Exosomal proteins of colorectal cancer cells
SY84_10235 (groEL)
Exosomal proteins of bladder cancer cells
SY84_10235 (groEL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
BD_b_sandwich
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AKH17350
UniProt:
A0A0F7JRT2
LinkDB
All DBs
Position
complement(2065491..2067128)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKQLVFDEQARRALERGVNAVANAVKVTLGPRGRNVVIEKKFGSPTITKDGVTVAKEVE
LEDKLENIGAQLLKEVASKTNDITGDGTTTATVLGQAVVKEGLRNVAAGANPLALKRGID
KAVAVAIEEIKKLAVPVEDSEAIKKVAGISANDEQVGQEIASAMDKVGKEGVITIEESKG
FDTEVDVVEGMQFDKGFINPYFITNPEKMEAVLEDAYILINEKKVSNLKDMLPILEKVAQ
TGRPLLIIAEDVEGEALATLVVNKLRGTLNIAAVKAPGFGDRRKEMLRDIAAVTGGEVVS
EDLGHKLENVTMEMLGRAARIRITKDETTIVDGRGEQSAIDARVNAIKGELDTTDSDYAR
EKLQERLAKLAGGVAVIRVGAATETELKEKKHRYEDALSTARSAVEEGIVAGGGTTLLRV
IPAVRKAAESLVGDEATGARILIRALEEPARQIAANAGEEGSVIVNAVINSDKPRFGFNA
ATGEYVEDMVAAGIVDPAKVTRTALQNAASIGALILTTEAIVSDKPEKAAPAAPAGGPDM
GGMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagctcgtgttcgatgaacaggcccgccgcgccctcgagcgtggcgtcaac
gccgtcgccaacgccgtcaaagtcaccctcgggccccgcggccgcaacgtcgtcatcgag
aagaagttcggcagccccaccatcaccaaggacggcgtcaccgtcgccaaggaagtcgaa
ctcgaggacaaactcgagaacatcggcgcccagctgctgaaagaagtcgccagcaagacc
aacgacatcaccggtgacggcaccaccaccgccaccgtcctcggccaggccgtcgtgaaa
gaaggcctgcgcaacgtcgccgccggcgccaaccccctcgccctgaagcgcggcatcgac
aaggccgtcgccgtcgccatcgaggaaatcaagaagctcgccgtgcccgtcgaggacagc
gaagccatcaagaaagtcgcgggcatcagcgccaacgacgagcaggtcggtcaggaaatc
gccagcgcgatggacaaggtcggcaaggaaggcgtcatcaccatcgaagagagcaagggc
ttcgacaccgaagtggacgtcgtcgaaggcatgcagttcgacaagggcttcatcaacccc
tacttcatcaccaaccccgagaagatggaagccgtcctcgaagacgcctacatcctcatc
aacgagaagaaggtcagcaacctcaaggacatgctgcccatcctcgaaaaagtcgcccag
accggccgtcccttgctgatcatcgccgaggacgtcgaaggcgaagcgctggccaccctg
gtcgtcaacaagctgcgcggcaccctgaacatcgccgccgtcaaggcccccggcttcggt
gatcgccgcaaggaaatgctgcgcgacatcgccgccgtcaccggcggggaagtcgtcagc
gaagacctcggccacaagctcgagaacgtcaccatggagatgctcggccgcgccgcccgc
atccgcatcaccaaggacgaaaccaccatcgtggacggccgcggtgagcagagcgccatc
gacgcccgcgtcaacgccatcaagggcgaactcgacaccaccgacagcgactacgcccgc
gagaaactccaggagcgcctcgccaagctggccggcggcgtcgccgtcatccgcgtcggt
gccgccaccgaaaccgaactgaaagagaagaagcaccgctacgaggacgccctgagcacc
gcgcgcagcgccgtggaagaaggcatcgtcgcgggcggcggcaccaccctgctgcgcgtc
atccccgccgtgcgtaaggccgccgagagcctcgtcggcgacgaagccaccggtgcccgc
atcctgatccgcgcgctcgaagagcccgcccgtcagatcgccgcgaacgccggtgaagaa
ggcagcgtcatcgtgaacgccgtcatcaacagcgacaagccccgcttcggcttcaacgcc
gccaccggcgagtacgtcgaagacatggtcgccgccggcatcgtcgaccccgccaaggtc
acccgcaccgcgctgcagaacgccgccagcatcggcgcgctgatcctcaccaccgaagcc
atcgtcagcgacaagcccgagaaggccgcgcccgccgcgcccgccggcggccctgacatg
ggcggcatggacttctaa
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