Deinococcus soli (ex Cha et al. 2016): SY84_10905
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Entry
SY84_10905 CDS
T04233
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dch02000
]
SY84_10905
Transporters [BR:
dch02000
]
Other transporters
Pores ion channels [TC:
1
]
SY84_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
GEVED
CARDB
Integrin_A_Ig_3
Big_9
Chlam_OMP6
Motif
Other DBs
NCBI-ProteinID:
AKH17463
UniProt:
A0A0F7JRU1
LinkDB
All DBs
Position
2215280..2220679
Genome browser
AA seq
1799 aa
AA seq
DB search
MAVSVDEDFGDAPASYDPTAAASHVVGDLKLGSTIDADNTGTLNGGTAITPSPNAVAAGA
DNTGTNGDGVDEDAISTFPVLTTASSTYSLTVPISGASQPGQVCGWVDYNRNGAFEVGER
ACAAFAAGASSVTLNWTGLSGLTGGTNYVRLRASYDTTGVQTPTGRLDSGEVEDYRLTIS
PAADLIVTKTNSVTSVNSGETTTYTVRVTNNGPSTATGALLTDAVVSGLNVTSVACSGTP
GQCTAGTTPTVAQLQAGYALPTLASGQFYEVTVTGTVTGTGGSLSNTAIVAAPSGITDPA
TANNSATDTDTINPPFVSTTPPVCSALPGNTGLGSNLVTDFSGGTFGVSSSDPTVASTGT
KSPAAWPYLSTNIPNYTYIQVSPNSPNDGFVSLVNRLSTPRIFNVWSSTLTPITVNSSGA
ASDDSATGRFLLVNGANPGNAVLVSTISGLTLNTNYQVTGLFANLFDNGATGALLPNVDI
YVNGVSYYKTGNIPQDQVAKWRRSGFVFNSGASTSVTFSLVNNVSSGNGNDFAFDQLNVN
QCQGNWVNTFSGYLYGDLNTSSTFQNPSEPQLPAGVTVDLRYIDANGNTVTVAKTTTGVG
ADTGKYVFTNVPPPPTGFTYFVHVENGTTAGETNTVPAGYTLTTPNDIALPGTPNYTSGT
NAAPDFGFRSTADLSITKTDGMTSVNAGGTTTYTIRVTNLGPNPTTAILTDAAVSGLNVT
AVSCSATPGRCTAGTTPTISQLQAGYGLPILASGETYELTVTATVTATSGSVANTATVTA
PAGTVDGTNTNNSATDTDTVTPVADLSVTKTDSVSSVNASGTTTYTIRVTNAGPSSVTGA
TLTDAAVAGLTVTSVTCSNTPGQCSAAPTVTQLQAGYALPALASGQFFEIRVTGTVTATG
GTLANTATVTAPSGTTDPTAGNNSATDTDTVTPVTDVAVSKAVNVVAAGPGGTVTYTIRA
WNNGPSPAGSATLTDTVSASLTGVTWTCAGTGGASCSAASGSGNAISLTVNLGTDTGSVT
TADTRYVTLTVTGTLVSSATGTLGNTASVSDASDSTPANNSASVSTRIVDAVNDTGSVTF
NQGATFTILANDTVGGAAATTTNATLPTIVTNGGLTGLSVNASGQLVLAASALNLPGTYT
VTYQICDATLTSACDTATIAITVTPAAADLAITKAQRAGTGGTFQTTALSVVQGGAVQYQ
IVVTNNGPSAVTNATFTDAVPANLTGLSVVSATGTGTTCTASFTGGTLNGTFSGASGTSC
TVTIQGTATTTGTFTNTATVTAPSGITDATTGNNTASVNTTVTPAADLAIDKSAPVAVGS
GRAVSYTIRVWNNGPSSVTGATVTDSLPSGFTVTGISCAATGTATCGTQTFTASSVTITT
GTLSLDTNAANATPDGNFLTYTLTGTAPASGTLSNTASVAAPAGTTDLPSGNNSSAAAVT
RVIDAVNDTTVNLAFGTGGTVTVLGNDTVGGAAATTANVAVTVQNAGGITGLTVNGSGQL
VVPAATPAGSYTVTYQICDATLTTACDAATVTVDVGAASADVIITKTGPAFAKPGETISY
TLTVTNAGPNAATAVTVSDTLPTGLTYVSSAPAATVSGQTLSWTLGTLAASASQTITVTA
TAPSEATLLSTPATRTLTNTASVSSATTDPTPANNTATAVTQMVAAKLTKSVRNVTQNTT
FGTSGGGLPGEVLEYCIAFENIGGAPLPNFVVTDHVPGTTNAQAGGYDAEEASAATGFGV
KLTRGTTTPTTSYFTSAADADTGALSSSGGTFGRGTMTVNLGALAVGDQGSVCFRTAIR
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagcgtcgacgaggacttcggtgacgcgccggccagttacgatcccacggcg
gctgccagccacgtggtcggggacctgaaactgggcagcaccatcgacgcggacaacacc
ggcaccctgaacggcggcacggcgatcacgcccagccccaacgcggtagccgcgggagcc
gacaacaccggcacgaacggcgacggtgtggacgaggacgccatcagcaccttcccggtc
ttgacgaccgcaagtagcacctacagcctgaccgtgcccatcagcggcgcaagtcagccc
ggccaggtgtgcggatgggtggattacaaccgcaacggggccttcgaggtcggggagcgc
gcctgcgcggcttttgctgccggtgcgtccagtgtgacactgaactggacgggcctgagt
ggcttgactggcggcacgaactacgttcggctgcgcgccagctacgacacgaccggtgtg
cagaccccaaccggccgactggacagcggtgaggtcgaggattaccgcctgacgatctca
cctgcggccgatctgatcgtcaccaagaccaacagcgtgaccagcgtcaactctggtgag
acgacgacctacacggttcgggtcacgaacaacggcccgagcaccgccacgggcgcactc
ctgacggacgcggtggtcagtgggctgaacgtcaccagtgtggcctgttcgggcaccccg
gggcagtgcacggcggggaccacgccgactgtcgcgcagctccaggccgggtacgccctg
ccgaccctggccagtggccagttctacgaagtgacggtgacgggcacggtgaccgggact
ggcggttccctgagcaacaccgcgattgtcgctgcgcccagtggtatcacggacccagcc
actgccaacaacagtgccactgatacggacaccatcaacccgccgttcgtctctaccacg
ccccccgtgtgttctgcactgcccggcaataccggcctgggcagcaacctcgtgacggac
tttagtggcggcaccttcggggtgagcagcagcgatccgaccgtggccagcaccggtacg
aaatccccggcagcgtggccgtacctgagtaccaacatccccaactacacctacattcag
gtcagcccgaacagcccgaacgacggcttcgtctcgctggtcaaccgcctgagcaccccg
agaatcttcaacgtctggagttccaccctgacccccatcactgtcaacagcagcggggcg
gcgtctgacgactcggccaccggacgcttcctgctcgtgaacggcgcgaaccccggcaac
gcggtactcgtctcgaccatcagtggcctcacactgaacaccaactatcaggtcactggc
ctgttcgccaacctcttcgacaacggcgcgaccggcgcactgctgcccaacgtcgacatt
tatgtcaacggcgtgtcgtactacaagactggcaacatcccgcaggaccaggtggccaaa
tggcgccgctcgggtttcgtcttcaactccggcgcttccacctccgtgaccttcagcctc
gtgaacaacgtctcttccggcaacggcaacgacttcgccttcgaccagctgaacgtcaac
cagtgtcaggggaactgggtaaacacgttcagcggctacctgtacggcgacctgaatacc
agcagcaccttccagaaccccagcgaaccccagctcccggccggcgtgaccgtggacctc
aggtacatcgacgcgaacggcaacactgttaccgtcgccaagaccaccacgggcgtcggg
gcggacaccgggaagtacgtcttcacgaacgttcccccacccccgaccggtttcacgtac
ttcgtgcacgtcgagaacggcaccacagccggagagacaaacaccgtacctgccggatat
acactgaccacccccaacgacatcgccctgcccggtacccccaactatacgagcggcacg
aacgctgctcctgacttcggcttccgcagcaccgccgatctgagcatcaccaagaccgat
ggtatgaccagcgtgaacgccggcggcaccacgacctacaccatccgtgtgaccaacctg
ggcccgaaccccaccactgcaatcctgactgacgcggccgtcagtggcctgaacgtcacg
gcagtcagctgctcagccaccccgggccgctgcacggccggcaccacgccgacgatcagc
cagctgcaggcgggttacggtctgcccatcctggccagcggggagacctatgagctgacc
gtcacggccaccgtcacggccaccagtgggagcgtcgccaacactgccaccgtcacggcg
ccggccggaacggtcgacggcacgaacacgaacaactcggccaccgataccgacaccgtg
acgccggtcgcggacctgagcgtcaccaagaccgacagtgtctccagcgtcaacgccagt
gggacgaccacgtacaccatccgcgtcaccaacgccgggcccagcagcgtcaccggcgcc
accctcaccgacgccgccgttgcgggcctgacggtgaccagcgtgacctgttccaacacg
cctggtcaatgcagcgctgcgcccacggtcacgcaactccaggccggatacgccctgcct
gccttagccagcggacagttcttcgagattcgcgtgacgggcaccgtcaccgccaccggc
ggcactcttgccaacaccgctactgtcaccgcgccgtctggcaccaccgaccccaccgcc
ggcaacaacagtgccaccgataccgatactgtcacgcccgtcacggacgtcgccgtgagc
aaggccgtgaacgtcgtggcggcgggacccggcgggaccgtcacgtacaccatccgcgcg
tggaacaacggcccgagcccggcaggcagcgctacgctgaccgacacggtgtccgccagc
ctgacgggggtgacgtggacgtgcgccgggacgggcggcgcgagctgcagcgcggccagc
ggcagcggcaacgccatcagcttgaccgtgaacctggggaccgacacggggtccgtcacg
acggccgacacccgctacgtgacgctgaccgtcacgggcaccctggttagcagcgcgacc
gggacgctcgggaacaccgcgagcgtgtcggacgcgagcgacagcacgcccgcgaacaat
tcggccagcgtcagcacccgcatcgtggacgccgtgaacgacacggggtccgtgaccttc
aaccagggcgccaccttcaccatcctggccaacgacacggtcggcggcgcggccgccacc
accacgaacgccacgctccccaccatcgtcaccaacggtggcctgaccggcctcagtgtg
aacgccagcgggcagctggtcctcgcggcctccgccctgaacctgcccggcacgtacacc
gtcacgtaccagatctgcgacgcgaccctcaccagtgcgtgcgacaccgccaccatcgcc
atcaccgtcacgcccgccgcggccgacctggcgatcacgaaagcgcagcgtgccggcacg
gggggcaccttccagaccaccgcactgagcgtggtgcagggcggggccgtgcagtaccag
atcgtcgtgacgaacaacggcccgagcgccgtgacgaacgcgaccttcacggacgccgtc
ccggccaacctgacgggcctgagcgtcgtgagcgcaaccgggaccggcacgacctgcacc
gcttccttcacggggggcactctgaacgggaccttcagcggggcgagtgggacgagctgc
acggtgacgatccagggcaccgcgacgacgaccgggacgttcacgaacaccgcgacggtg
acggcgccctcgggcatcacggacgcgacgaccgggaacaacaccgccagcgtgaacacc
accgtcacccccgccgccgacctggcgatcgacaagagtgcgccggtcgcggtgggcagc
ggccgcgcggtcagctacaccatccgcgtgtggaacaacggccccagcagcgtcacgggc
gccaccgtcacggacagcctgcccagcgggttcaccgtgaccggcatcagctgcgccgcg
accggcaccgccacctgcgggacccagaccttcaccgccagcagcgtcacgatcacgacc
ggtacgctgagcctggacacgaacgcggcgaacgccacgccggacgggaacttcctgacg
tacaccctgaccggcaccgcgcccgccagcggcacgctgagcaacaccgccagcgtcgcc
gcgcccgccgggacgaccgacctgccgtccgggaacaacagcagtgctgccgccgtcacc
cgcgtcatcgacgccgtgaacgacaccaccgtgaacctcgccttcgggacgggcggcacc
gtgaccgtcctgggcaacgacacggtcggcggcgcggcggccaccacggcgaacgtcgcc
gtgaccgtgcagaacgccggtgggatcaccggcctgaccgtgaacggcagcgggcaactg
gtcgtgcccgccgcgacgcccgccgggtcgtacaccgtcacgtatcagatctgcgacgcg
accctcacgaccgcctgcgacgcggccaccgtgacggtcgacgtgggtgcggcctctgcc
gacgtgatcatcacgaagaccggaccggccttcgcgaagcccggcgagaccatctcgtac
accctgaccgtcacgaacgccggtccgaatgccgcgacggccgtcaccgtgagtgacacg
ctgcccacgggcctcacgtacgtgagcagcgcgcccgccgcgacggtcagcggccagacg
ctcagctggacgctgggcaccctggcggccagcgcctcgcagaccatcaccgtgaccgcc
accgccccaagtgaggcgacgctgctgagcacgcctgccacgcggaccctgacgaacacc
gcgtccgtcagcagcgccaccaccgatcccacccccgcgaacaacaccgccactgccgtc
acgcagatggtcgcggcgaaactcaccaagtccgtgcgcaacgtcacgcagaacaccacc
ttcggcacgtccggcggcggcctccccggcgaggtcctcgagtactgcatcgccttcgag
aacatcggcggcgcgcccctgccgaacttcgtggtgaccgaccacgtgcccggcaccacg
aacgcccaagccggcgggtacgacgcggaggaagcgagtgcggcgacgggcttcggcgtg
aaactcacgcgcgggacgaccacgccgaccacctcgtacttcacgagcgcggccgacgcg
gacaccggcgcgctgagcagcagtggcgggacgttcgggcgcggcacgatgaccgtgaac
ctgggcgccctggccgtgggtgatcagggcagcgtgtgtttccgcaccgccatccgctga
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