KEGG   Deinococcus soli (ex Cha et al. 2016): SY84_13700
Entry
SY84_13700        CDS       T04233                                 
Name
(GenBank) exodeoxyribonuclease V
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
dch  Deinococcus soli (ex Cha et al. 2016)
Pathway
dch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SY84_13700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dch03400]
    SY84_13700
Enzymes [BR:dch01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SY84_13700
DNA repair and recombination proteins [BR:dch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SY84_13700
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_RecD2 UvrD_C_2 Viral_helicase1 SH3_13 OB_YrrC AAA_11 HHH_5 AAA_25 nSTAND3 TraI_hel_assoc_N AAA_16 AAA_28 AAA_22 AAA PhoH NAT10_TcmA_helicase NTPase_1 NPHP3_N ETF_alpha AAA_18 KTI12 MeaB
Other DBs
NCBI-ProteinID: AKH17902
UniProt: A0A0F7JQ37
LinkDB
Position
2818466..2820601
AA seq 711 aa
MSAAVPTEAFRVTGGVNKVRFRADSGFTVMTARIRNAEGEDPDATVIGVMPPLEAGDTFS
ADVLMEEHREYGYQYRVLNLVLEAQPADLSEAGIAAYLEARVGGVGKVLAGRIAGTFGAA
TFDILESDPDRLLQVPGVTASTLHKMTSSWSQQGLERRLLAGLQGLGLSITQAQRAVKHF
GEAALERLTADLFTLTEVEGIGFLTADKLWQAQGGALDDPRRLTAAAVYALQQAAQQGGH
SYLPRARAEKGVVHYTRVTPAQARLAVETAVELGRLSDDTPPLLDTEDALHDPSRIYLPP
TLRAEKKLASLIRTLIATPPAGDEWTVPKGAAKGLSAEQAGVLDLLAEHRLVVLTGGPGT
GKSTTTRAVADLAEQLGLEVGLCAPTGKAARRLGEVTGRAASTIHRLLGYGPAGFRHNHL
EPAPYDLLIVDEVSMCGDGLMLSLLAAVAPGARVLLVGDTDQLPPVDAGLPLHALTQTAP
TVRLTQVYRQAAENPIIRAAHGLLHGQAPAWGDPRLNLTETEPDVGARRVALLVRDMGGP
TQVQVLTPMRKGPLGVELLNHHLQSLFNPGEGGVRIGDSHARPGDIVVQTKNDYTNEVFN
GTVGTVLKADGSRLTVDFDGNIVELAGAELFNLQLGYALTVHRAQGSEWGTVLGVLHEAH
MPMLSRNLVYTALTRARDRFYAVGSATSWQRAATRQREERCTALLERIRGR
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgtctgctgccgttccaaccgaggcgttccgcgtgaccggcggcgtgaataaagtgcgg
ttccgcgccgattcgggcttcacggtcatgaccgcccgcatccgcaacgccgagggcgag
gaccccgacgcgaccgtgatcggcgtgatgccgcccctggaggccggggacaccttcagt
gccgacgtgctcatggaggagcaccgcgagtacggctaccagtaccgcgtgctgaacctc
gtgctggaggcgcagcccgccgacctgtccgaggcgggcatcgccgcgtacctggaagcg
cgggtgggcggcgtgggcaaggtcctggccgggcgcatcgcggggacgttcggcgcggcg
accttcgacatcctggagagcgacccggaccgactgctgcaggtgccgggcgtgacggcc
agcacgctgcacaagatgacctccagctggtcgcagcagggcctggaacgccgcctgctg
gccgggttgcagggcctgggcctgagcatcacgcaggcgcagcgggccgtgaaacacttc
ggcgaggccgccctggaacgcctgaccgccgacctcttcaccctgaccgaggtcgagggg
atcgggttcctgaccgccgacaagctgtggcaggcgcagggcggcgcgctggacgaccct
cgccgcctgaccgccgcggccgtgtacgccctgcaacaggcggcgcagcagggcgggcac
tcgtacctgccgcgcgcccgcgcggagaagggcgtggtgcactacacccgcgtgacgccc
gcgcaggcccggctggccgtcgagacggccgtggaactgggtcgcctgagcgacgacacg
cccccgctgctggacaccgaggacgcgctgcacgaccccagccgcatctacctgccgccc
accctgcgcgccgagaagaaactcgccagcctgatccgcacgctgatcgccacgcccccc
gccggggacgagtggaccgtgccgaagggcgcggcgaagggcctgtccgctgagcaggcg
ggcgtgctggacctgctcgccgagcaccggctggtggtcctgaccggcgggcccggcacc
ggcaagagcaccaccacccgcgccgtcgcggacctcgccgagcagctggggctggaggtc
ggcctgtgcgccccgaccggcaaggccgcgcgccgcctgggcgaggtgacgggccgcgcg
gcgagcaccattcaccgcctgctggggtacggcccggcgggcttccggcacaaccacctc
gaacccgccccgtacgacctgctgatcgtggatgaggtcagcatgtgcggcgacggcctg
atgctctcgctgctcgcggcggtcgcgccgggcgcgcgggtgttgctggtcggtgacacc
gatcagttgcccccggtggacgccgggctgcccctgcatgccctgacccagacggccccc
actgtccgcctgacgcaggtgtaccggcaggcggccgagaaccccatcatccgtgccgcg
cacggcctgctgcacgggcaggcccccgcctggggcgacccccgattgaacctcacggag
accgaaccggacgtcggcgcccggcgcgtggcgctgctcgtgcgcgacatgggcggcccc
acgcaggtgcaggtcctgacccccatgcgcaagggcccgctgggcgtggagctgctcaac
caccacctccagagcctcttcaaccccggtgagggcggcgtgcgtatcggggactcgcac
gcgcggcccggtgacatcgtcgtgcagaccaaaaacgactacaccaacgaggtcttcaac
ggtacggtcggcaccgtcctgaaggccgacggctcgcgcctgaccgtggacttcgacggg
aatatcgtcgaactggccggggcggaactgttcaacctgcaactcgggtacgcgctgacc
gtccaccgcgcgcagggcagcgagtggggcaccgtgctcggcgtgctgcacgaggcgcac
atgccgatgctcagccgcaacctcgtgtacaccgccctgacccgcgcgcgcgaccgcttc
tacgccgtggggtccgcgacctcgtggcagcgcgccgcgacccggcagcgcgaagaacgc
tgcacggcgctgctcgaacgtatccgcgggcgctga

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