Deinococcus soli (ex Cha et al. 2016): SY84_13700
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Entry
SY84_13700 CDS
T04233
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Pathway
dch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SY84_13700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dch03400
]
SY84_13700
Enzymes [BR:
dch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SY84_13700
DNA repair and recombination proteins [BR:
dch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SY84_13700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
AAA_25
nSTAND3
TraI_hel_assoc_N
AAA_16
AAA_28
AAA_22
AAA
PhoH
NAT10_TcmA_helicase
NTPase_1
NPHP3_N
ETF_alpha
AAA_18
KTI12
MeaB
Motif
Other DBs
NCBI-ProteinID:
AKH17902
UniProt:
A0A0F7JQ37
LinkDB
All DBs
Position
2818466..2820601
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AA seq
711 aa
AA seq
DB search
MSAAVPTEAFRVTGGVNKVRFRADSGFTVMTARIRNAEGEDPDATVIGVMPPLEAGDTFS
ADVLMEEHREYGYQYRVLNLVLEAQPADLSEAGIAAYLEARVGGVGKVLAGRIAGTFGAA
TFDILESDPDRLLQVPGVTASTLHKMTSSWSQQGLERRLLAGLQGLGLSITQAQRAVKHF
GEAALERLTADLFTLTEVEGIGFLTADKLWQAQGGALDDPRRLTAAAVYALQQAAQQGGH
SYLPRARAEKGVVHYTRVTPAQARLAVETAVELGRLSDDTPPLLDTEDALHDPSRIYLPP
TLRAEKKLASLIRTLIATPPAGDEWTVPKGAAKGLSAEQAGVLDLLAEHRLVVLTGGPGT
GKSTTTRAVADLAEQLGLEVGLCAPTGKAARRLGEVTGRAASTIHRLLGYGPAGFRHNHL
EPAPYDLLIVDEVSMCGDGLMLSLLAAVAPGARVLLVGDTDQLPPVDAGLPLHALTQTAP
TVRLTQVYRQAAENPIIRAAHGLLHGQAPAWGDPRLNLTETEPDVGARRVALLVRDMGGP
TQVQVLTPMRKGPLGVELLNHHLQSLFNPGEGGVRIGDSHARPGDIVVQTKNDYTNEVFN
GTVGTVLKADGSRLTVDFDGNIVELAGAELFNLQLGYALTVHRAQGSEWGTVLGVLHEAH
MPMLSRNLVYTALTRARDRFYAVGSATSWQRAATRQREERCTALLERIRGR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgccgttccaaccgaggcgttccgcgtgaccggcggcgtgaataaagtgcgg
ttccgcgccgattcgggcttcacggtcatgaccgcccgcatccgcaacgccgagggcgag
gaccccgacgcgaccgtgatcggcgtgatgccgcccctggaggccggggacaccttcagt
gccgacgtgctcatggaggagcaccgcgagtacggctaccagtaccgcgtgctgaacctc
gtgctggaggcgcagcccgccgacctgtccgaggcgggcatcgccgcgtacctggaagcg
cgggtgggcggcgtgggcaaggtcctggccgggcgcatcgcggggacgttcggcgcggcg
accttcgacatcctggagagcgacccggaccgactgctgcaggtgccgggcgtgacggcc
agcacgctgcacaagatgacctccagctggtcgcagcagggcctggaacgccgcctgctg
gccgggttgcagggcctgggcctgagcatcacgcaggcgcagcgggccgtgaaacacttc
ggcgaggccgccctggaacgcctgaccgccgacctcttcaccctgaccgaggtcgagggg
atcgggttcctgaccgccgacaagctgtggcaggcgcagggcggcgcgctggacgaccct
cgccgcctgaccgccgcggccgtgtacgccctgcaacaggcggcgcagcagggcgggcac
tcgtacctgccgcgcgcccgcgcggagaagggcgtggtgcactacacccgcgtgacgccc
gcgcaggcccggctggccgtcgagacggccgtggaactgggtcgcctgagcgacgacacg
cccccgctgctggacaccgaggacgcgctgcacgaccccagccgcatctacctgccgccc
accctgcgcgccgagaagaaactcgccagcctgatccgcacgctgatcgccacgcccccc
gccggggacgagtggaccgtgccgaagggcgcggcgaagggcctgtccgctgagcaggcg
ggcgtgctggacctgctcgccgagcaccggctggtggtcctgaccggcgggcccggcacc
ggcaagagcaccaccacccgcgccgtcgcggacctcgccgagcagctggggctggaggtc
ggcctgtgcgccccgaccggcaaggccgcgcgccgcctgggcgaggtgacgggccgcgcg
gcgagcaccattcaccgcctgctggggtacggcccggcgggcttccggcacaaccacctc
gaacccgccccgtacgacctgctgatcgtggatgaggtcagcatgtgcggcgacggcctg
atgctctcgctgctcgcggcggtcgcgccgggcgcgcgggtgttgctggtcggtgacacc
gatcagttgcccccggtggacgccgggctgcccctgcatgccctgacccagacggccccc
actgtccgcctgacgcaggtgtaccggcaggcggccgagaaccccatcatccgtgccgcg
cacggcctgctgcacgggcaggcccccgcctggggcgacccccgattgaacctcacggag
accgaaccggacgtcggcgcccggcgcgtggcgctgctcgtgcgcgacatgggcggcccc
acgcaggtgcaggtcctgacccccatgcgcaagggcccgctgggcgtggagctgctcaac
caccacctccagagcctcttcaaccccggtgagggcggcgtgcgtatcggggactcgcac
gcgcggcccggtgacatcgtcgtgcagaccaaaaacgactacaccaacgaggtcttcaac
ggtacggtcggcaccgtcctgaaggccgacggctcgcgcctgaccgtggacttcgacggg
aatatcgtcgaactggccggggcggaactgttcaacctgcaactcgggtacgcgctgacc
gtccaccgcgcgcagggcagcgagtggggcaccgtgctcggcgtgctgcacgaggcgcac
atgccgatgctcagccgcaacctcgtgtacaccgccctgacccgcgcgcgcgaccgcttc
tacgccgtggggtccgcgacctcgtggcagcgcgccgcgacccggcagcgcgaagaacgc
tgcacggcgctgctcgaacgtatccgcgggcgctga
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