Deinococcus soli (ex Cha et al. 2016): SY84_15105
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Entry
SY84_15105 CDS
T04233
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dch
Deinococcus soli (ex Cha et al. 2016)
Pathway
dch03030
DNA replication
dch03410
Base excision repair
dch03420
Nucleotide excision repair
dch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SY84_15105
03410 Base excision repair
SY84_15105
03420 Nucleotide excision repair
SY84_15105
03440 Homologous recombination
SY84_15105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dch03032
]
SY84_15105
03400 DNA repair and recombination proteins [BR:
dch03400
]
SY84_15105
Enzymes [BR:
dch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SY84_15105
DNA replication proteins [BR:
dch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SY84_15105
DNA repair and recombination proteins [BR:
dch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SY84_15105
NER (nucleotide excision repair)
GGR (global genome repair) factors
SY84_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AKH18124
UniProt:
A0A0F7JS25
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All DBs
Position
3119721..3122501
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AA seq
926 aa
AA seq
DB search
MTSASPDTLVLIDGHALAFRSYFALPPLTNKQGEATNAILGFLRLTLRLARQRSNQVIVV
FDPPVKTFRHEQFDGYKSGRAETPADLPGQINRIREIVDAIGFPRLEEPGYEADDVIASL
TRKAEGTGMQVRIVTSDRDAYQLLDDHVRVITNDFRLIGPAEVLEKYGVTVGQWVDYRAL
TGDASDNIPGAKGIGPKTAAKLLQEYGTLEGIYAAAKAGTLKPDGTRQKLLDSEEAVEFS
HRLSCMVTDLPLNVELGAGRLPGNPDRLHELLTELDLHSVKRDVAALDGIESVLSVPDAV
HDSTHRDALHDAPETADVPAAPTLTIQTAEWRTPAQGVIWGYRLSREDDLTAALVDAATL
ELDGTAGTVRTAPTTEPAEWRRAEAYAQPGGLFDTPDEPAAPLTKTQQKAAEKARKEQEK
AAAKLREQYPATVDDAQFVAQRTVTAAAAKALAAHLSVRGTQVEPGDDPLLMAYLLDPAN
TTMSAVTQRYLNVPWPDDAAGRAAITAQLLDLLPPLLDDARRKLYDDMEKPLSAVLARME
VRGVRLDSEYLRGLSAATGARLSTLETQIHSLAGREFQIRSRDQLEAVLYDELGLASGKK
TKLTGKRSTAVAALEPLRDEHPIIPALLEYRELEKLRGTYLDPLPNLVNPRTGRLHTTFA
QAAVATGRLSSLNPNLQNIPIRSETGREIRKGFIADQGFCLISADYSQIELRLLAHIADD
PLMQQAFQEGADIHRRTAAQVLGLNEGTITPDQRRAAKTVNFGVLYGMSAHRLSNDLGIP
YADAAGFIETYFATYPGIRAYIDRTLEFGRQHGYVETLYGRRRYVPELVATNRTLREAGE
RLAYNMPIQGTAADIIKYAMITLERELQGTGARLLLQVHDELLLEAPEDKAEEISDTVRR
IMESAASLKVPLAVEVGVGPNWYDTK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcctcccccgataccctggtgctgatcgacggacacgctctggcgttccgg
tcgtacttcgcgctgccaccactcacgaacaaacagggggaagccaccaacgccatcctg
ggcttcctgcgcctcacgctgcgcctcgcccggcagcgcagcaatcaggtcatcgtggtg
ttcgacccgcccgtgaagaccttccggcacgagcagttcgacgggtacaagtccggccgc
gccgagacgcctgccgacctgcccggccagatcaaccgcatccgcgagatcgtggacgcc
atcggcttcccccgcctagaagaacccgggtacgaggcggacgacgtgatcgccagcctg
acccgcaaggccgagggcaccggcatgcaggtccggatcgtgaccagcgaccgcgacgcg
taccagctgctggacgaccacgtgcgcgtcatcacgaacgacttccgcctgatcggcccg
gccgaggtgctcgaaaagtacggcgtgaccgtggggcagtgggtggactaccgcgcgctg
accggcgacgccagcgacaacatccccggcgcgaagggcatcggcccgaaaaccgccgcg
aaactgcttcaggagtacggcacgctggagggcatctacgccgccgcgaaggccggcacg
ctgaaacccgacgggacccgccagaaactcctcgattccgaggaagccgtggagttcagt
caccggctgtcctgcatggtcacggacctgccgctgaacgtggaactcggcgcgggccgc
ctgccgggcaacccggaccgcctgcacgaactgctgaccgagctggacctgcactccgtc
aagcgtgacgtggccgcactggacggcatcgagagtgtcctgagcgtccccgacgcggtg
cacgacagcacccaccgggacgcgctgcacgacgcccccgagaccgccgacgtgcctgcc
gccccgaccctgaccatccagaccgccgagtggcgcacccccgcgcagggcgtcatctgg
ggctaccgcctgtcccgcgaggacgacctgaccgccgcgctcgtggacgccgccaccctg
gaactcgacggcacggccggcaccgtccgcaccgcgcccaccaccgaacccgccgagtgg
cgcagggccgaagcatatgcccagcccggcggcctgttcgacacccccgacgaacccgcc
gcgcccctgaccaagacgcagcaaaaggccgccgagaaggcccgcaaggagcaggaaaag
gccgccgcgaaactccgcgagcagtatcccgccaccgtggacgacgcgcagttcgtcgcg
cagcgcaccgtcaccgccgccgccgccaaggccctcgccgcgcacctgagcgtccgcggc
acccaggtcgaacccggcgacgaccccctgctgatggcgtacctgctcgaccccgccaac
accaccatgagcgccgtcactcagcggtacctgaatgtcccctggcccgacgacgccgcc
ggacgcgccgcgatcaccgcgcaactcctcgacctcctgccgcccctgctggacgacgcc
cgccgcaagctatacgacgacatggagaaacccctgtccgccgtgctggcccgcatggaa
gtgcgcggtgtgcgcctggacagcgagtacctgcgcggcctgtccgccgccaccggcgcc
cgcctgagcaccctggaaacccagatccactcgctggccggacgcgaattccagatccgc
agccgcgaccagctcgaagccgtcctgtacgacgaactcggcctcgccagcggcaagaag
accaagctcaccggcaagcgcagcaccgccgtcgccgccctcgaacccctgcgggacgag
caccccatcatccccgccctgctcgagtaccgcgaactggaaaaactgcgcggcacgtac
ctcgaccccctcccgaacctcgtcaacccccgcacggggcgcctgcacaccaccttcgct
caggcggccgtcgccaccgggcgcctgagcagcctcaaccccaacctccagaacatcccc
atccgcagcgaaaccggccgtgagatccgcaagggcttcattgccgaccagggcttctgc
ctgatcagcgccgactactcccagatcgaactgcgcctcctggcgcacatcgccgacgat
cccctcatgcagcaggccttccaggagggcgcggacatccaccgccgcaccgccgcgcag
gtgctcggcctgaacgagggcaccatcacgccggatcagcgccgcgccgccaagaccgtc
aacttcggcgtgctgtacggcatgagcgcccaccgcctcagcaacgacctgggcattccc
tacgcggacgccgccggcttcatcgaaacgtacttcgccacgtaccccggcatccgcgcg
tacatcgaccgcaccctcgaattcggccgccagcacggctacgtcgagaccctctacggc
cgccgccgctacgtgccggaactcgtcgccacgaaccgcaccctgcgcgaggccggggaa
cgcctcgcgtacaacatgcccatccagggcaccgccgccgacatcatcaagtacgccatg
atcaccctggaacgcgaacttcagggcaccggcgcccgcctcctgctgcaggtgcacgac
gaactgctcctcgaagcccccgaagacaaggccgaggagatcagcgacaccgtccgccgc
atcatggaaagtgccgccagcctcaaggtgcccctggccgtcgaggtcggcgtcggtccc
aactggtacgacacgaagtaa
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