KEGG   Diaphorina citri (Asian citrus psyllid): 103512050
Entry
103512050         CDS       T07332                                 
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
dci  Diaphorina citri (Asian citrus psyllid)
Pathway
dci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103512050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dci03019]
    103512050
   03041 Spliceosome [BR:dci03041]
    103512050
Messenger RNA biogenesis [BR:dci03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103512050
Spliceosome [BR:dci03041]
 Complex B
  Other components
   Prp19-related factors
    103512050
 Complex C
    103512050
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_2 TPR_12 NRDE-2 TPR_15 TPR_8 TPR_10 DHR-2_Lobe_A PPR TRPM_tetra HTH_Tnp_Mu_1
Other DBs
NCBI-GeneID: 103512050
NCBI-ProteinID: XP_026681317
UniProt: A0A3Q0IYK1
LinkDB
Position
Unknown
AA seq 748 aa
MAIINTLDVFFNEEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPG
SYKLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKI
TQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEY
LSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRG
GLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELS
LNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVR
LFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVP
YTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIK
LWSLYADLEESFGTFKVRSLSRTTALLNLVLPHVSHEDITIFIQPLPIYPQAYEKGIALF
KWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGL
ARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMC
LKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKR
SVQAQYNTQVNMMSLLTAGTLHLLTLKS
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggctattattaatactttggatgtgttctttaatgaagaggacctgccatatgaagaa
gaaatattgcgtaacccattttctgtgaaacattggttgcgatacattgaacacaagaag
aatgcaccaaaagctatcatcaacactatctatgagagatcactcaaggaactgcctgga
agttataagctgtggtacaattatctgaagctacggagaaaacaagtcaaaggcaaagtg
attacagatccaagttatgaagatgtgaacaatacttttgaacggagcctggtgttcatg
cataaaatgccacggatctggctggactacggccggtttctcatggaccagcacaagatc
acacagacccgacatgtgtttgatcgagcgttgcgtgctcttcccatcacccagcatcat
cgagtctggcctctgtacctcagctttgtcaagagccatgctgtgcccgaaaccgctgta
cgagttttccgacgctacttaaagctgtttccagaggatgcagaggactacatcgagtac
ctatcatccatagagcgtctggacgaggctgccgtcaaactggcatacattgtgaacaag
gagagttttgtttccaaacacggcaagtccaaccatcagctctggaatgaactgtgcgag
atgatatcgcagaacccagataaaatcagatctctcaatgtagatgccattatccgggga
ggtttgaggcggtacacagatcagttgggacacttgtggaattctctggcagactattac
atccgcagtggtttatttgaaagggcacgtgatatttacgaggaagctattcagacggta
accacggtgcgagatttcactcaagtgttcgatgcttacgctcagtttgaagaactgagt
ctgaacaagcggatggaggagattgcagagaacgatacacccagcgaagaagatgacatc
gagttagagctccgtctggctcgactagaggacctgatggagcgtcgtctcctcctactc
aactctgtgctacttcgtcagaacccacacaacgtattggagtggcacaaacgcgtgcga
ttgttcgatggcaaaccgctggatatcattcggacgtacacggaagcggtgaaaaccgtg
gatccgaagctggcggtgggcaagctgcataccctgtggatagagtttggcaaattctac
gaggtcaatgaccagctggaagatgcgcggttgattttcgacaaggccaccctggtcccg
tatacgaaagtggaggatctggccactgtgtggtgtgagtgggccgagctggagctcagg
gcaggccaggaagaggccgctctcaggctaatggccagagcgacggccacgcctgcccgg
cctgtggcctatcacgatgaggctgagactgtacaggcccgcgtgtacaagagtatcaag
ctgtggtccctgtatgctgacctggaggaatcgtttggtactttcaaggtaaggtcactt
tcaagaactaccgcgctccttaatttagtacttccacatgtttctcatgaagatattacc
atatttattcaacctcttcccatctatcctcaggcatacgagaaaggtattgccctgttc
aagtggccctacatcttcgacatctggaacacctacctcaccaaattcctatcccgctac
ggaggaacaaaactagaacgggctagagatctgtttgaacaatgtctagaagcttgtcca
ccccgctacgctaagactttgtacttgctgtatgcaaaactagaggaggagcatggcctc
gccagacatgctatggcggtgtatgagagagctacgggggccgtgctaccagaggagatg
tttgagatgttcaacatttacatcaagaaggcggccgagatctacggcatccccaagact
cgtcagatctacgagcgagccatcgagtctctccccgaagagccgacgcgtcagatgtgc
ctcaagttcgcggaaatggagaccaagctgggcgaaatagaccgcgcgcgcgccatctac
gcacattgctctcagatctgtgacccgcgcgtgacagccgggttctgggcggcgtggaaa
tcgttcgagatcacgcacgggaacgaggacaccatgcgtgagatgttgcggattaagagg
agtgtgcaagcgcagtacaatactcaggtgaacatgatgtctctattgactgcaggtact
cttcaccttcttacactaaaatcctaa

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