Diaphorina citri (Asian citrus psyllid): 103512050
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Entry
103512050 CDS
T07332
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103512050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dci03019
]
103512050
03041 Spliceosome [BR:
dci03041
]
103512050
Messenger RNA biogenesis [BR:
dci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103512050
Spliceosome [BR:
dci03041
]
Complex B
Other components
Prp19-related factors
103512050
Complex C
103512050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_12
NRDE-2
TPR_15
TPR_8
TPR_10
DHR-2_Lobe_A
PPR
TRPM_tetra
HTH_Tnp_Mu_1
Motif
Other DBs
NCBI-GeneID:
103512050
NCBI-ProteinID:
XP_026681317
UniProt:
A0A3Q0IYK1
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MAIINTLDVFFNEEDLPYEEEILRNPFSVKHWLRYIEHKKNAPKAIINTIYERSLKELPG
SYKLWYNYLKLRRKQVKGKVITDPSYEDVNNTFERSLVFMHKMPRIWLDYGRFLMDQHKI
TQTRHVFDRALRALPITQHHRVWPLYLSFVKSHAVPETAVRVFRRYLKLFPEDAEDYIEY
LSSIERLDEAAVKLAYIVNKESFVSKHGKSNHQLWNELCEMISQNPDKIRSLNVDAIIRG
GLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEELS
LNKRMEEIAENDTPSEEDDIELELRLARLEDLMERRLLLLNSVLLRQNPHNVLEWHKRVR
LFDGKPLDIIRTYTEAVKTVDPKLAVGKLHTLWIEFGKFYEVNDQLEDARLIFDKATLVP
YTKVEDLATVWCEWAELELRAGQEEAALRLMARATATPARPVAYHDEAETVQARVYKSIK
LWSLYADLEESFGTFKVRSLSRTTALLNLVLPHVSHEDITIFIQPLPIYPQAYEKGIALF
KWPYIFDIWNTYLTKFLSRYGGTKLERARDLFEQCLEACPPRYAKTLYLLYAKLEEEHGL
ARHAMAVYERATGAVLPEEMFEMFNIYIKKAAEIYGIPKTRQIYERAIESLPEEPTRQMC
LKFAEMETKLGEIDRARAIYAHCSQICDPRVTAGFWAAWKSFEITHGNEDTMREMLRIKR
SVQAQYNTQVNMMSLLTAGTLHLLTLKS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctattattaatactttggatgtgttctttaatgaagaggacctgccatatgaagaa
gaaatattgcgtaacccattttctgtgaaacattggttgcgatacattgaacacaagaag
aatgcaccaaaagctatcatcaacactatctatgagagatcactcaaggaactgcctgga
agttataagctgtggtacaattatctgaagctacggagaaaacaagtcaaaggcaaagtg
attacagatccaagttatgaagatgtgaacaatacttttgaacggagcctggtgttcatg
cataaaatgccacggatctggctggactacggccggtttctcatggaccagcacaagatc
acacagacccgacatgtgtttgatcgagcgttgcgtgctcttcccatcacccagcatcat
cgagtctggcctctgtacctcagctttgtcaagagccatgctgtgcccgaaaccgctgta
cgagttttccgacgctacttaaagctgtttccagaggatgcagaggactacatcgagtac
ctatcatccatagagcgtctggacgaggctgccgtcaaactggcatacattgtgaacaag
gagagttttgtttccaaacacggcaagtccaaccatcagctctggaatgaactgtgcgag
atgatatcgcagaacccagataaaatcagatctctcaatgtagatgccattatccgggga
ggtttgaggcggtacacagatcagttgggacacttgtggaattctctggcagactattac
atccgcagtggtttatttgaaagggcacgtgatatttacgaggaagctattcagacggta
accacggtgcgagatttcactcaagtgttcgatgcttacgctcagtttgaagaactgagt
ctgaacaagcggatggaggagattgcagagaacgatacacccagcgaagaagatgacatc
gagttagagctccgtctggctcgactagaggacctgatggagcgtcgtctcctcctactc
aactctgtgctacttcgtcagaacccacacaacgtattggagtggcacaaacgcgtgcga
ttgttcgatggcaaaccgctggatatcattcggacgtacacggaagcggtgaaaaccgtg
gatccgaagctggcggtgggcaagctgcataccctgtggatagagtttggcaaattctac
gaggtcaatgaccagctggaagatgcgcggttgattttcgacaaggccaccctggtcccg
tatacgaaagtggaggatctggccactgtgtggtgtgagtgggccgagctggagctcagg
gcaggccaggaagaggccgctctcaggctaatggccagagcgacggccacgcctgcccgg
cctgtggcctatcacgatgaggctgagactgtacaggcccgcgtgtacaagagtatcaag
ctgtggtccctgtatgctgacctggaggaatcgtttggtactttcaaggtaaggtcactt
tcaagaactaccgcgctccttaatttagtacttccacatgtttctcatgaagatattacc
atatttattcaacctcttcccatctatcctcaggcatacgagaaaggtattgccctgttc
aagtggccctacatcttcgacatctggaacacctacctcaccaaattcctatcccgctac
ggaggaacaaaactagaacgggctagagatctgtttgaacaatgtctagaagcttgtcca
ccccgctacgctaagactttgtacttgctgtatgcaaaactagaggaggagcatggcctc
gccagacatgctatggcggtgtatgagagagctacgggggccgtgctaccagaggagatg
tttgagatgttcaacatttacatcaagaaggcggccgagatctacggcatccccaagact
cgtcagatctacgagcgagccatcgagtctctccccgaagagccgacgcgtcagatgtgc
ctcaagttcgcggaaatggagaccaagctgggcgaaatagaccgcgcgcgcgccatctac
gcacattgctctcagatctgtgacccgcgcgtgacagccgggttctgggcggcgtggaaa
tcgttcgagatcacgcacgggaacgaggacaccatgcgtgagatgttgcggattaagagg
agtgtgcaagcgcagtacaatactcaggtgaacatgatgtctctattgactgcaggtact
cttcaccttcttacactaaaatcctaa
DBGET
integrated database retrieval system