Diaphorina citri (Asian citrus psyllid): 103512290
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Entry
103512290 CDS
T07332
Name
(RefSeq) 5'-3' exoribonuclease 1 isoform X2
KO
K12618
5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03008
Ribosome biogenesis in eukaryotes
dci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103512290
09123 Folding, sorting and degradation
03018 RNA degradation
103512290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dci03019
]
103512290
03009 Ribosome biogenesis [BR:
dci03009
]
103512290
03016 Transfer RNA biogenesis [BR:
dci03016
]
103512290
03036 Chromosome and associated proteins [BR:
dci03036
]
103512290
Messenger RNA biogenesis [BR:
dci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103512290
mRNA degradation factors
5'-3' decay
5' exonucleases
103512290
Ribosome biogenesis [BR:
dci03009
]
Eukaryotic type
Pre-60S particles
RNases
103512290
Transfer RNA biogenesis [BR:
dci03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103512290
Chromosome and associated proteins [BR:
dci03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103512290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_N
XRN_M
XRN1_D2_D3
XRN1_D1
SH3_12
Motif
Other DBs
NCBI-GeneID:
103512290
NCBI-ProteinID:
XP_017300828
UniProt:
A0A1S4EFA5
LinkDB
All DBs
Position
Unknown
AA seq
2092 aa
AA seq
DB search
MGVPKFFRYISERYPCLSEVVREYQIPEFDNLYLDMNGIIHNCSHPNDNDPHFRITEKQI
FQDIFHYIEILFRMIQPKKLFFMAIDGVAPRAKMNQQRGRRFRSAKEAEEAEVLEQKAKE
KGERLPTEKRFDSNCITPGTPFMCRLHQQLRYFVKLKITTDKLWKDVCVILSGHETPGEG
EHKIMDYIRYMKSKPDYNPNMRHCLYGLDADLIMLGLCTHEPYFSLLREEVKFNTKSNKG
GSQIVTPEETKFFLLHLSLMRDYLELEFGKLKEPGVLSFPFSIENIIDDWVLMGFLIGND
FIPNLPDLHIINGALPLLYKVYQEVLPTLDGYINEGGYLNLKRFEKFLTKLASFDFEQFR
EKYADIQYLEGKMGKKFSDVFHKEKSKEMDPDLAALIKATDDDYDDGTEEVLNYANYEEY
YYSDEDEEWRTNFFSEFGQHKTDYYHYKLDYAKVTNEVLRDQAECYIRAIQWNLHYYYNG
CVSWSWYYPHHYAPYISDIKDFSHLNLKYEMGEPFLPFQQLLAVLPAASKELLPEPYQNL
MTLENSPILEYYPEEFATDLNGKKQDWEAVVLIPFIDEVKLIKAMDAVEHLLTDEERSRN
RHGPMLVYTYSNVNLGTALAPDYFPAINENHAVEKPLYRDDIYVHPNKLRKGLCQDVNLK
LYVTHFPTLKHVQFTHKIENAKVKVFQQPSRNESIIIVQDKVQVPSLKQVADQILGKTIF
INYPHLIEIRVQAVATKDSRISFDKNSGPVFERAAKDMQDAFQLSKKSITDGYYTKLGVD
IGNTEVLVYGQPVESRKYFFGPRGKVTQQRTFIRSTVTYAYQSAVLNLQQARESLEYKTI
DEIFYPGCQCFALSNPHYGSGGCVISTVKEENSFIKLSFKVQQEPDLSDLVHLQDDTVYN
YLPSYTVASKLSISPLLLSRFTGSIFIIDSTEEGAKRHNIGLNIKFSRKNEEVVGFTRRD
ETTKKWFYTEQVVTLIKNYMKQFPEVFGFLKDHSSDDIYLRDDVFPHQGEQRVAQIVSWL
KEQPHAKAEVRPCGAAVVDAKVVSLIEHAVDTCEKVEKQITLFVKPNKLYIPKPTLDKLC
PDPDTKFKLFDRVVNIRDCYTVPLGYRGTIIGIVQGETSYDAMYDVVFDKPFPHGVKIRC
SESRGYRMPAQAMINLSYGERLCGNSNPHVKNINVMQSRGERNTNYAQVTRQPQRTTFYK
ENAPLVNSNLQVTSPYHVKVSRCNSQQSSVSQSPSSTMISQQSSPFNVKPTEKTEPPPPH
KLNQVNTSSAPKEKPRTSEQNQIKSNGNEQKVIINKEERCIFSNATYSIPTTQNSELFST
GGMSFFGYPNLLDIPENKNKLLTGEITANKMETKPEKATCPQDKEVEEITNGTQTITMND
LYQSANKRSENGFNIPSISDLIKQNNITAKTDYPTTSTFPEVKYTNSPSDNGGRTATPDT
SFTTKLTNLFNRSSSNDTEAENTFKRAISAMVQQSPHLLEKNKELNTPSGGELSFEEKHS
MAAKSKNETTPTIKTEMRKIISSSDYQGLEEEEEEEVMIIEIKEDLQQQQTVEPEQNKQA
VSTDPFKEFLCKLKVNSQAHNAIQVDTKSIPTIDQLENPSDININTITADTINDFFVEAS
RRQALSQKINVNTEVDTNSKHIVPNTHIRKPSNESSGVNASDMLKKMLNIESTSPSQADP
AMSTRTLVHVNQEPVEQIQKPMSAFTVVKPTTTAGDQDKTKVMPKNALLSSLKNKPQALN
PCVPSFIPPQVQKQHIDKIKPLVSQFPPHPDQLAQPGDDVTSLIRPQPGPVRGHTNSSDL
SRSTNAQPRGIPILGSQAAMYNPSVPYQQQQQYQYYYNQQQPMYYPQQVAYPPPVQVYPN
SLPGRTSQSTQSTGQIIHSQTYYSHQNQVQTQQAPQQSLWHSQPGAYQNRTSTSQFQPYQ
QARHPQYSKPPHPILNASSQPVPPDTTEDLEERADSYLAKLLRLTRAHNLGAPDYTFSMD
ASKLYVATVRICHPHSDIVVRGKPCAKKADSVEICARRAFNELTQIYPTAPNTKSASDVT
RAETKTAVAAQPAPQNTEVDQTDKNTAAAAEKKEKKAPRIAAKFKTPLNLKN
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccaaaatttttccgttacatcagtgagcggtacccatgtctgagtgaagtc
gttcgagagtatcagatccctgaatttgacaacctctaccttgacatgaatgggatcatt
cataattgttctcaccccaatgacaatgatcctcatttccgaatcacagagaaacaaatt
ttccaggacatatttcattacattgaaattctgtttcgtatgattcagccaaaaaaattg
ttcttcatggcaattgatggtgtggctccccgtgctaaaatgaatcaacagagaggcaga
cgattccgttctgccaaggaagcagaagaagcagaagttttggaacagaaagccaaggaa
aagggagagcgattacccacagagaaacggtttgactcgaactgtatcacacctggcaca
cccttcatgtgtagattacatcaacaactcagatattttgtaaagctgaaaataacaaca
gacaagttatggaaggatgtttgtgtcatattatcaggacatgagacacctggcgagggg
gaacataagatcatggattatatccgatacatgaaatccaaacctgattataaccccaac
atgagacattgtctctatgggttggatgcagatctcatcatgctaggactatgtacacat
gaaccttacttcagtctcctcagggaagaggtcaagttcaatacaaagagtaataaagga
ggctcccagatagtgacaccagaagaaaccaagttctttttgttacatttgtctctgatg
cgcgattatttggagttggagtttggaaaactgaaagagcctggtgtgttgagttttcca
ttcagcattgagaatatcattgatgactgggtgttgatgggattcctcattggaaatgat
ttcataccaaacctgcctgacttgcacatcatcaatggtgccctccctctcctctacaaa
gtctatcaagaagtgctaccaaccctcgatgggtacataaacgaaggtggctatctgaat
ttgaagaggtttgagaaattcttaaccaaactggcatcctttgatttcgaacaattccga
gagaaatacgcggacattcagtacttggaaggtaaaatggggaagaaattcagtgatgtg
ttccataaagagaagagtaaagagatggatcctgacctggctgccttgataaaagcaaca
gatgatgattatgacgacggaactgaagaggttctgaactatgccaactatgaagaatat
tactatagtgatgaagatgaagagtggaggaccaacttcttcagtgagtttggacaacac
aagacagactattaccactacaagctagactatgccaaagttaccaacgaggttttgcga
gaccaggccgagtgttatattcgcgctatacaatggaacttgcactactactacaacggc
tgtgtatcatggtcatggtactatcctcatcattacgcaccctatatttcagacattaaa
gatttctctcacttgaatctcaagtacgaaatgggagaaccattcttgccatttcaacaa
ctgttagcagtattacctgctgctagtaaagaactcttgccagaaccatatcaaaatctg
atgacattggaaaactcacccattcttgaatattatcctgaagaatttgcaacagatttg
aatggaaagaaacaggactgggaagcagtcgtgttgattcctttcattgatgaagtcaaa
ctgattaaagcgatggatgctgtggaacatcttctcacggatgaggagaggtctaggaat
agacatggtcctatgctagtgtacacatatagtaatgtaaatcttggtaccgccttggcc
cctgactatttccccgctattaacgaaaatcacgctgtagagaaaccattgtaccgagat
gatatctatgtccatcctaataaactcaggaaaggtctctgtcaggatgttaacttgaag
ctctatgtgacgcatttccccaccctcaaacatgtccagtttacacacaagatagagaat
gccaaggtgaaggtatttcaacaaccaagtcgtaacgaaagtattattattgtacaagat
aaagtacaggtgccaagtctgaagcaagtcgcagatcaaatcctagggaaaaccattttc
atcaattacccacacttgattgaaatcagagtacaagctgttgctacaaaagatagtcgc
atttcattcgataaaaattctggtcctgttttcgaaagagcagccaaagacatgcaagat
gcgttccaactatcgaagaaatccataacagatggctattatactaaacttggcgttgat
ataggaaacacagaagttctggtgtatggacaaccagtggaaagtagaaaatatttcttc
ggacctcgtggtaaagtgacacaacagagaactttcatcagaagtacagtcacctatgct
tatcagagtgccgttctcaatcttcaacaggcgagagagtcccttgagtacaagacgatt
gatgaaatcttctaccctggatgtcaatgttttgccctcagtaatcctcactacggtagt
ggaggctgcgtcatcagtactgttaaagaagagaatagtttcatcaagttgagctttaaa
gttcaacaggaacctgatctctcggacttggttcacttgcaggatgacacggtatataat
tatctgcctagttatacggtggcaagtaagctttctatctcgccattactcttgtcacga
ttcacagggagtatatttatcatagacagtacagaggaaggtgcaaaacgacataacatt
ggactgaacattaaattcagtcgaaagaatgaagaggttgtaggatttacacgacgggat
gaaacaaccaagaaatggttctacacagagcaagtggtgacattgattaagaactatatg
aaacaattccctgaagtgtttgggttcctcaaggatcactcatcggatgatatttatcta
cgagatgatgtgtttccacatcagggtgaacagagagtcgctcagattgtcagctggttg
aaggaacaaccacacgctaaagcagaagtacgaccgtgtggtgcggctgtggtggatgca
aaggttgtcagcctcattgaacacgctgtagatacatgtgagaaagttgagaaacaaatc
acgctgtttgtcaagccaaacaagttgtatattcctaaaccaacactagataaactatgt
ccagatccagatactaagttcaaattgtttgatcgtgtcgtaaacatacgagactgctac
actgtaccactaggatatcgaggtactattattggtatagtccagggtgagacaagttac
gatgcaatgtatgatgttgtgtttgataagccatttccacacggtgttaagatccgctgc
tcagagtcccgggggtatcgcatgccagcccaagccatgattaacctctcctatggtgaa
cgtctctgtggtaacagcaaccctcatgtgaagaacataaacgtcatgcaatctagaggc
gagagaaataccaactatgcccaagtcacgagacaaccacaacgtactactttctataaa
gagaatgcaccacttgtgaactctaacttgcaagtcacatcaccttaccatgtgaaagtg
tctaggtgtaactcccagcagagttccgtgtctcagtctccaagcagtacaatgatatca
caacaatcgtctccattcaatgtcaaaccaacggagaaaactgagccaccaccaccacac
aagttgaaccaagtcaatacttctagtgcacccaaagaaaaacctagaacatctgaacag
aatcagatcaagtctaatggcaatgaacagaaggtgatcatcaacaaagaagaaagatgc
atattctccaatgcaacctactcgataccaaccactcaaaactcggaactattttccact
ggagggatgtcattctttggctatcccaatctattagatattcctgaaaacaagaacaaa
ctgttgacgggtgagattacagcaaacaagatggagaccaaaccagagaaagcaacttgt
cctcaagacaaagaagttgaggaaataacaaatggaacccaaacgataaccatgaatgat
ctctatcagagtgcaaacaagcgatcagagaacggattcaacatcccgtccatatccgac
ctcatcaagcagaacaacatcacagctaaaacagattatccaacaacaagtaccttccca
gaggtcaaatataccaactctcccagtgacaatggaggtagaacagcaactccagataca
agtttcacaactaaactgaccaacctgttcaaccgaagcagctccaatgataccgaagct
gagaatacattcaagcgtgccatctccgccatggttcagcaaagtccacatctattagag
aaaaataaagaactaaacacaccatctggcggagaactctcgtttgaagagaaacactcc
atggcagccaaaagcaaaaatgaaaccacgccaaccatcaaaaccgaaatgcggaaaatc
atttcttcttctgattaccaaggactagaagaggaggaagaggaagaagtaatgatcatt
gagatcaaagaagatctacagcaacaacaaacagtagagccggaacaaaataaacaagct
gtcagtacagatccattcaaagagttcttgtgtaaattgaaagttaacagtcaagcacac
aatgccatacaagttgatactaaaagtataccaaccatagaccaattagagaatcctagt
gatatcaacatcaacacaataactgctgacactataaacgatttctttgtagaggcatct
aggagacaagctctgagtcaaaagatcaatgtaaacacagaggttgatactaatagtaaa
catattgtcccaaacacacacatcagaaaacctagcaacgaaagtagtggtgtaaacgca
agtgatatgttgaagaaaatgctcaatattgaatccacttctccaagccaagcagaccct
gccatgtcaaccagaacccttgttcatgtaaaccaagagccagtcgaacaaatacagaaa
cccatgagtgctttcactgttgtcaaaccaacgaccactgccggagatcaagacaaaact
aaagtgatgcccaaaaacgcgctcttgtcgagtttgaaaaacaaaccgcaagcacttaac
ccttgcgttcccagttttattcctccgcaagttcaaaagcaacacattgataaaatcaaa
cctcttgtgagtcagttcccaccacatcctgatcaacttgcccaaccaggggatgatgtg
acgtcactcatacgacctcaacccggccctgtacgaggacacacgaacagttccgatctc
tcccgaagtacaaatgctcagcctcgcggtattcctatcctaggcagtcaggctgctatg
tacaatccatctgtcccttaccagcagcagcaacagtaccagtattactacaatcagcaa
caacccatgtactatcctcagcaagtagcctatcctccaccggtacaagtctatcctaac
tcactaccagggagaacctctcagtctacacagagcacaggacaaatcattcactcacaa
acgtattattcacaccaaaaccaagtacaaactcaacaagcgccacaacaaagtctatgg
cattcccagccaggcgcataccaaaaccgaacaagcacctcccagttccagccttatcaa
caggccagacatcctcagtacagtaagccacctcatcccatactcaacgcatcctcccag
cctgtacctcccgatactacagaagatctagaggagcgcgctgactcttaccttgccaaa
ctcctgcgtctgacgcgcgcacataaccttggcgcgccagactataccttctccatggac
gcgagcaaactatacgtcgcgaccgtgcgcatctgtcacccgcacagcgacattgtcgta
cgcggcaagccgtgcgcaaagaaagcggactcggttgagatctgcgcgcgccgcgcattc
aatgaattgacgcagatctatccgactgcgccgaacacgaaaagtgccagtgacgtcaca
agggcggaaacgaagaccgctgtagcggcacaaccggcgccccagaacaccgaagtcgat
cagacggacaagaacacggccgcagctgcggaaaagaaagagaagaaggcgccgaggata
gcggctaaatttaaaacgccgctgaatctgaagaactga
DBGET
integrated database retrieval system
