Diaphorina citri (Asian citrus psyllid): 103516729
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Entry
103516729 CDS
T07332
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103516729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dci03019
]
103516729
Enzymes [BR:
dci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103516729
Messenger RNA biogenesis [BR:
dci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103516729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
DNA_pol_A_exo1
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
103516729
NCBI-ProteinID:
XP_026684836
UniProt:
A0A3Q0J8T0
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MCDINRHNFLEKFDDIKKSIEEAKFIAVDCEFSGLVENPIFKNSLFDSAEERYKKLKEAT
QGFVIIQIGITTFKYIPQANNYESNVYNFQLCPKWYGSDDTILFQRSCLIFLCAHKFDFN
EFIYNGISYLNKSDQARVKQDLDSDTWFNNIEHPFLNDDELQIQTICSHINWWLLTCSPG
DSTTVSLMWVEDSYVMNYVLLYEITHRFLRKGVCAFLRSNEIHVEKFNTGDASLKQSRET
LQHELLQVAKSQAWQSMLGFSQVFQLLVEHKKPLIGHNLLTDLLFMYKQFHQPLPSSLKR
FKTEISRLFPCVYDTKFISYEIKSKLEKNQKWSNNGLSGLYEWLRDHSNITHLLLYAPKL
KLMDGVSKLAYDKRVAEMFADFGSVDVRYHTSNSALVAAGNHVCARLSLDKLRNHPLYTI
STYRPHKQLILDTIYTLGVLSSLIGGVALGYLVLSKPKL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatatcaaccgacataatttcttagaaaagtttgacgatatcaagaaatccatt
gaagaagctaaattcattgctgttgattgtgagttcagtggtcttgtagagaaccccatt
ttcaaaaacagtttatttgattctgctgaagaaagatataaaaagctgaaggaagccaca
caaggttttgtcataatacaaattggcataacaacattcaagtacattccccaagcgaac
aattacgaaagtaatgtgtacaattttcaactatgtcccaagtggtatggctctgacgac
acaattctttttcagcgatcatgcttgatcttcttatgtgctcacaagtttgatttcaat
gagtttatatacaatggtatctcctatctgaataaatccgaccaggctcgagtcaagcaa
gacttggactcggacacttggtttaataacattgagcatccttttctcaacgatgacgag
ttgcaaatccagaccatctgtagtcacatcaattggtggcttctcacgtgttcccctggg
gactcaacaactgtgtctctcatgtgggttgaagatagttatgtgatgaactatgtgctc
ctgtacgaaataacacataggtttctcagaaaaggcgtgtgtgcctttttaagatcaaat
gagatccacgtagagaagttcaacacaggtgatgctagtttgaaacagtcccgcgagaca
ttacagcatgaactactccaagtagccaaatctcaggcctggcagtctatgctaggattt
agccaggttttccaactactggtagaacacaagaagcctcttattggccacaacttactt
acagatctcctctttatgtacaaacaatttcaccagcccctaccatcaagtctgaaaaga
ttcaagacagaaatatcccgcctgtttccatgtgtgtacgacacgaaattcatcagctat
gaaatcaagtcgaagctagagaaaaatcagaagtggagtaacaatggactcagtggtctg
tatgaatggctgcgagatcattctaatataacccacctcctgttgtacgcacctaagctc
aaattgatggatggagtatcgaagttggcttacgacaaacgagtcgctgagatgtttgca
gacttcggttcggtggatgtgagatatcatacgtcaaactctgctctggtagctgcagga
aatcatgtctgcgctcgtctttcattagataaattgaggaaccaccctctgtatacgatc
agcacatatcgccctcacaaacaactcatactcgacactatttacacactcggggttctc
tcttctctgattggtggagtggctcttggttacctcgtactgtctaaacctaaactatga
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