Diaphorina citri (Asian citrus psyllid): 103516737
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Entry
103516737 CDS
T07332
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dci03016
]
103516737
Enzymes [BR:
dci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
103516737
Transfer RNA biogenesis [BR:
dci03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103516737
Prokaryotic type
tRNA splicing ligases
103516737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
ScdA_N
Motif
Other DBs
NCBI-GeneID:
103516737
NCBI-ProteinID:
XP_008479947
UniProt:
A0A1S3DFH5
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MVVRQYNEELKYLEKISSHCWKIKKGFQPNMNVEGVFFVNDHLEKLMLEELRNSCRPGMV
GGFLPGVKQIANVAALPGIVGRSVGLPDVHSGKLPSTQWLSDNTMRSSNIWKRSPLTLGA
GNHYAEIQIVDEIYDKWAASKMGIEDVGQVCVMIHSGSRGFGHQVATGNLLGAGNHYAEI
QIVDEIYDKWAASKMGIEDVGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDR
QLACARINSNKNKAFAKQFNTTPDDLDMHVIYDAFAKQFNTTPDDLDMHVIYDVSHNIAK
TEEHMVDGKQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEK
GMQETFGSTCHGAGRALSRAKSRRNLDYQEVLNKLESQGISIRVASPKLVMEEAPESYKN
VTDVVDTCHAVGISKKTFKLRPVAVIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggttgtccgacaatacaatgaggagctcaaatatttggaaaagatctcctctcactgt
tggaaaatcaagaagggattccaacctaatatgaacgtggaaggagtgttctttgtcaat
gatcacctagagaagttgatgttggaagaactccgcaattcatgtagaccaggaatggtt
ggaggttttctgcctggagtaaaacaaatcgccaacgtagcagctttacccggcattgtg
ggaagatctgtaggcctccctgatgtacattctggtaagttgccatctacacaatggttg
tccgacaatacaatgaggagctcaaatatttggaaaagatctcctctcactctgggagct
ggcaaccactacgctgagattcaaatagtggatgagatctatgacaaatgggcagcgagt
aagatgggtatagaggatgtgggacaggtgtgtgtgatgatacattccggcagtcgagga
tttggccatcaagtagccactggtaatttactgggagctggcaaccactacgctgagatt
caaatagtggatgagatctatgacaaatgggcagcaagtaagatgggtatagaggatgtg
ggacaagtgtgtgtgatgatacattccggtagtcgaggatttggccatcaagtagccact
gatgctctggttcaaatggagaaggccatgaagagagataacatagagacgaacgatcga
caactggcgtgtgcccggatcaattcaaataaaaataaagcatttgccaaacagttcaac
acaacaccagatgaccttgacatgcatgtgatttatgatgcatttgccaaacagttcaac
acaacaccagatgaccttgacatgcatgtgatttatgatgtaagccacaatattgccaaa
actgaagaacatatggtagatgggaaacagaaaactctgctagtacataggaagggttca
acccgagcctttcctccccatcatccactaatcccagtggattatcaactcacgggacaa
ccggtactgataggcgggaccatgggcacctgctcctatgttctgaccgggacggaaaag
gggatgcaggagacgtttgggtcgacatgtcatggtgcgggacgcgccctatcccgggcc
aagtcccggcggaatctcgactatcaggaggtgctaaacaagctcgagtctcagggtata
tccatacgggtagcatctcccaagttggtcatggaagaggcaccagaatcctacaagaat
gtgactgatgtagtggacacttgccatgcagtgggcatttccaagaagacgttcaagcta
cgaccagtcgcggttatcaaagggtaa
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