Diaphorina citri (Asian citrus psyllid): 103520176
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Entry
103520176 CDS
T07332
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dci03016
]
103520176
Enzymes [BR:
dci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
103520176
Transfer RNA biogenesis [BR:
dci03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103520176
Prokaryotic type
tRNA splicing ligases
103520176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
103520176
NCBI-ProteinID:
XP_026687201
UniProt:
A0A3Q0JFF6
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAAFDIGDPKSVVSPGGVGFDINCGVRLLRTNLWEKDVLPVQERLAQSMFDHIPVGVGSK
GIIPMNARDLEEALEMGMDWSLREGYIWAEDKEHCEEYGRMLNADPSKVSMRAKKRGLPQ
LGTLGAGNHYAEIQIVDEIYDKWAASKMGIEDVGQVCVMIHSGSRGFGHQVATDALVQME
KAMKRDNIETNDRQLACARINSKEGQDYLKSMAAAANFAWVNRSSMTFLCRQAFAKQFNT
TPDDLDMHVIYDVSHNIAKTEEHMVDGKQKTLLVHRKVSEPSHPGFQPAPSLPISTNPSG
LSTHRGQPVLIGGTMGAPASYVLTGDGKKGMQEDVLVDMSGQLTTRTAASTSVTMSETGA
FKVPIAAAIRKIMGLWQFNTN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgacattggtgatcccaagtctgttgtgtctcccggtggtgtagggttt
gacatcaactgtggtgtacgtctcctgagaaccaacctgtgggagaaagatgttctgcct
gtccaggagcgcctagcacagagtatgtttgatcacatcccagtgggtgttggatcgaag
gggatcatcccgatgaatgctcgggacctggaggaagccctggagatgggcatggattgg
tcgctgcgtgagggatacatttgggctgaggacaaggaacattgtgaagagtatgggcgg
atgctgaatgccgacccgagtaaagtcagcatgagagcgaagaaacgaggattaccacag
ttgggaactctgggagctggcaaccactacgctgagattcaaatagtggatgagatctat
gacaaatgggcagcgagtaagatgggcattgaggatgtgggacaggtgtgtgtgatgata
cattccggcagtcgaggatttggccatcaagtagccactgatgctctggttcaaatggag
aaggccatgaagagagataacatagagacgaacgatcgacaactggcgtgtgcccggatc
aattccaaggaggggcaagattatttgaagtccatggcagccgcagctaactttgcctgg
gtcaataggagctccatgactttcctatgtcgacaggcatttgccaaacagttcaacaca
acaccagatgaccttgacatgcatgtgatttatgatgtaagccacaatattgccaaaact
gaagaacatatggtagatgggaaacagaaaactctgctagtacataggaaggtaagtgaa
ccaagtcatccggggtttcaacccgcgccttccctccccatatccactaatcccagtgga
ttatcaactcaccggggacaaccggtactgataggcgggaccatgggcgcacctgcttcc
tatgttctgaccggggacgggaaaaaggggatgcaggaagacgttctggtcgacatgtct
ggtcaactaaccacgcgcaccgctgcctcaacttcagtgaccatgagcgaaactggtgct
ttcaaggtacctattgccgccgctatccgcaagattatgggtctatggcagttcaataca
aactaa
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