Diaphorina citri (Asian citrus psyllid): 103520516
Help
Entry
103520516 CDS
T07332
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dci
Diaphorina citri (Asian citrus psyllid)
Pathway
dci03020
RNA polymerase
dci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103520516
09124 Replication and repair
03420 Nucleotide excision repair
103520516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dci03021
]
103520516
03400 DNA repair and recombination proteins [BR:
dci03400
]
103520516
Enzymes [BR:
dci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103520516
Transcription machinery [BR:
dci03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103520516
DNA repair and recombination proteins [BR:
dci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103520516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103520516
NCBI-ProteinID:
XP_017304155
UniProt:
A0A1S4EPN9
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MSVQRIVEDSPQIDLQAEAQHTSTEVETPPRYLLKFEQIYLSKPTHWEKDGSPSPMMPNE
ARLRNLTYSAPLYVDITKTVVRQGEEPVTTQHQKSFIGKIPIMLRSTYCLLNGLTDRDLT
ELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDSKYAYKTEIRSCLEHSSRPT
STLWVNMMARGGQSLKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDF
DDPEMMEMVKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVG
VSDFCETKKAYFLGYMVHRLLLASLGRRELDDRDHYGNCPQGKLAQXVIIFIYFFCFISC
VPQEVRMYAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVL
NRLTFASSLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMA
YISVGSQPSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMGTLRKL
RRQMDIIVSEVSIIRDIRDREIRIHTDAGRICRPLLIAENGSLLLKKRHIDNLKERDYNN
YGWQVLVQSGVVEYIDTLEEETTMIAMSQTTXGTSLSSLRNFQWMTKXSSIQGSPRKLLN
XTYLILSSLPFQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELP
AGINSIVAILCYTGYNQEDSVILNASAVERGYFRSVFFRSYKDAESKRIGDQEEQFEKPN
RQTCQGMRNAIYDKLDDDGIIAPGLRVSGDDVVIGKTITLPENEDELEGTTKRFSKRDGS
TFLRNSETGIVDQVMLTLNVDGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQED
MPFTCEGLTPDIIINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDAVNVQKIST
LLQEYGYQLRGNEVMFNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQ
PMEGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANMRNN
TFECKGCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcagcgaattgtggaagattcccctcaaattgatctgcaagctgaggcccag
catacttccaccgaggttgaaacacctcctcgatacctactcaaattcgagcagatctat
ctctccaaacccacccattgggaaaaagatggttcaccatcgccgatgatgcctaatgaa
gctcgactgaggaatctaacatattccgctcctctctatgtggacattaccaaaactgtt
gtccggcaaggagaggagcctgtcacgacacaacatcagaagtctttcataggcaagatc
cctattatgttgaggtcaacttactgtctactgaacggactcacagatcgtgatttgact
gagttgaatgaatgtccactagatcccggtggctatttcattatcaatggatctgaaaag
gtactcatagctcaggagaagatggcaaccaacacagtgtatgtgttcagcatgaaagat
agcaagtacgcgtacaagacagagattcgaagttgtttagagcactcgtcccgacccacc
tccacactatgggttaatatgatggctagaggtggtcaaagtctgaagaaatcagccata
ggtcagcgtattatcgccattctaccctacattaaacaggagatccccattatgattgta
ttccgagccctgggctttgtggctgaccgagacatcctcgaacacattatctatgatttt
gatgatcctgagatgatggaaatggtaaaaccatcactggacgaagcgttcgtaattcag
gaacagaatgtggctctgaatttcatcggggctcgcggtgccagacccggggttactaag
gagagacgtatcaaatacgcgagggaaattctgcagaaggaaatgttgccacatgtggga
gtgtccgacttttgcgagacgaaaaaggcgtacttcttgggatacatggttcatcggtta
ctgttggcctccttaggacgtagagagttggatgaccgagatcactacggtaactgtcct
caaggaaaactagcccagtaagtaattatatttatttatttcttttgttttatttcatgt
gttccgcaggaagtgcgtatgtacgctcagaagttcatcgatcgtggtaaggacttcaac
ctggagttggctatcaagacgaagatcattacagacggtctgagatattctctggccaca
ggcaactggggggatcagaagaaggcccatcaagccagagcgggcgtgtcccaggtgttg
aatcgtctcacgttcgcctcgtccctgtcccatctccgtcgtgtcaactcccccattggt
cgtgacggtaaactcgccaagcctcgccagctgcacaacaccctctgggggatgatctgc
ccggccgaaaccccggaaggcgcggccgtcggcctcgtgaagaatctggccctcatggcc
tacattagtgtcggatcgcagccgtcccccattctggagtttctggaggagtggtccatg
gagaatctggaggaaatcgctcccagcgctattgccgatgcgacgaagatttttgtcaat
ggatgttgggtgggtattcatcgggaccccgaacagctgatgggcaccctacgcaagctc
cgtcgtcagatggacatcattgtgtccgaagtgtcgattattcgcgacattcgagatcgc
gagattcgtattcacacagacgcgggtcgaatttgtcgacccctgctgattgctgaaaac
ggatccctgctactgaagaagagacacattgataatctcaaggagagggattataacaac
tacgggtggcaagtactagtacagtcgggtgtagtcgagtacatcgacacgctggaagag
gagaccacaatgatagccatgtcccaaacaacataaggaacctctctgtctagtttgaga
aactttcagtggatgaccaaatgatcatccattcaaggatcaccacggaagttgctcaac
tgaacttacttaattctttcctctctcccatttcagagtgctatgggtaagcaagctatg
ggcgtgtacatcaccaactttcacgtacgtatggacactctggcccatgtcctgtactac
cctcacaaacccctcgtcaccaccagatctatggagtatctgcggttccgagagctaccg
gctgggattaacagtattgtagctatcctgtgctataccggatataaccaggaggactcc
gttatcctcaatgcttctgctgtcgagagaggatacttccgatctgtgttcttccgatcc
tacaaggatgcggaatcgaagcgtatcggggatcaggaagagcagttcgagaaaccgaac
cgacaaacctgtcagggaatgcgaaacgcgatctacgataaactggacgacgacggtatc
attgcgcccggactaagagtgtcgggagacgatgtcgtgattgggaagacgatcacgctg
cccgagaacgaggacgagttggaagggactaccaagcggttcagcaagcgagacgggtcc
acattcctgcgtaactccgagaccggtattgtagaccaggtcatgttaacgctcaacgta
gacggatacaagttctgtaagattcgcgtgcggtccgtacgtataccgcagatcggggac
aagttcgcatcccggcatggacagaaggggacgtgcggtattcaatatcgacaagaggac
atgccgttcacgtgtgaaggtctcacgccagatattattatcaatcctcacgctattcca
tctcgtatgacaattggccatttaatcgagtgtcttcaaggcaaggtgtcctcaaacaag
ggcgagataggagatgctaccccattcaacgatgctgtcaatgtacagaagatctctacc
ctactacaggagtatggatatcagttgagaggcaatgaagtgatgttcaatggacacaca
ggacgtaagatcaacgctcaggtgttcttgggacctacctactatcaacgtctcaagcat
atggtggacgacaagattcattcccgagctaggggtcccgtgcagatcctagtgagacaa
cctatggagggaagagctagggatggagggttgcggtttggagagatggaacgtgactgt
caaatatcgcacggagctgcccaatttctacgtgagcgcctgtttgaagtgtcggacccg
taccgtattcacgtgtgtaacttctgcggactcattgctattgctaatatgaggaataat
acgttcgagtgtaagggttgcaagaataagactcagatatcccaggttcgactcccgtac
gcagccaaacttctgttccaagaactcatgtccatgaacatcgctccccgattaatggtc
gtgtag
DBGET
integrated database retrieval system
