Dolichospermum compactum: NIES806_07490
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Entry
NIES806_07490 CDS
T10125
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dcm Dolichospermum compactum
Pathway
dcm03420
Nucleotide excision repair
dcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES806_07490
03430 Mismatch repair
NIES806_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcm03400
]
NIES806_07490
Enzymes [BR:
dcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES806_07490
DNA repair and recombination proteins [BR:
dcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES806_07490
MMR (mismatch excision repair)
Other MMR factors
NIES806_07490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
ResIII
AAA_22
GA
Motif
Other DBs
NCBI-ProteinID:
BAZ84559
UniProt:
A0A1Z4UZM3
LinkDB
All DBs
Position
815147..817474
Genome browser
AA seq
775 aa
AA seq
DB search
MTTNIDFLTHLNPSQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLIIKHRVNPENILA
VTFTNKAAKEMKERIQRIFTEPLAISQHGKKFDLLTEYEQSLLKTQVYRTTIKDMWCGTF
HSLFSRILRWDIEKYQDEKGRKWNKNFSIFDESDVQSVIKEIVTKDLNLDSKKFEPKSIR
YAISNAKNQGLSPQQFESEQPDYRGRVIADVYNRYQDKLAQNNALDFDDLILIPTRLFQQ
NEQVLGYWHQKFCHILVDEYQDTNRTQYDLIQLLVTNGESRKNEWKWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQENFGDGLADDDTRSMVKLEENYRSCENILQAANELIENNTQRI
DKILKATREPGEEIYCHKADEEMAEAAFVINQIRNLEHQNPELNWGNFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDAVAYLRAINNPADTVSLLRVINTPRRGIGKST
VDALVNASQQLGTTLWEILSDETSVNTLAGRSAKAVNNFAAMIQNRQEQVKVVPGSEILQ
GILEDSRYIKELQDQATDEADNRISNVNELYNAMLQFQEENAGEDISLQAFLQSAALSSD
LDNLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLQDPSLLEEERRLCYVGI
TRAQERLFLSHARERRLYGSREPAMRSQFLDEIPTELLTTQNKVTRSSTKTTSATTSKQS
TPGIWQVGDRVLHKSFGLGEITHVFGEGNKVSVAIKFLSLGQKIVDPRVAQLQKV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatattgattttctgactcatcttaatcctagtcaacgtcaagcggtcgaa
cactactgcggaccattattagtggtagctggtgctggttcagggaaaacccgggcgctg
acttaccgcattgctaatttgattattaaacatcgtgttaatcctgaaaatatcctcgcg
gtgacatttacgaataaagctgcaaaggaaatgaaggaacgaattcaaaggatatttact
gaaccattagcaatatcacaacatggtaaaaaatttgatttactgacagaatatgaacaa
agcttactaaaaacacaggtttaccgcactactattaaagatatgtggtgtggaactttt
catagtttattctcgcggattctgcgctgggatatcgaaaaatatcaagatgaaaaaggc
agaaaatggaataaaaacttttctatctttgatgaatcggatgtccaaagtgtgattaaa
gaaattgttaccaaagatttaaatttagatagtaaaaaatttgaacctaaatctattcgc
tacgctattagtaatgctaaaaatcaaggactttctccccaacaatttgaaagtgaacaa
ccagactatcgaggtagggtgattgctgatgtttataatcgctatcaagataaacttgcc
caaaataatgctttagattttgatgatttaattttaattcctactcgattatttcaacaa
aacgaacaagttttaggttattggcatcaaaaattttgtcatattctagttgatgaatat
caagatactaaccgaactcaatatgatttaattcagcttttggtaacaaatggggaaagc
cggaaaaatgaatggaaatggcaaaatcgatctgtgtttgtggttggtgatgctgaccag
tcaatttatagttttagaatggcagattttaccattttgctagagtttcaggaaaatttt
ggggatggtttagcagatgatgatactcgttctatggtgaaattagaagaaaattatcgc
tcatgtgaaaacattctccaagctgctaatgaattaattgaaaataatactcaacggatt
gataaaatcctcaaagccacaagagaaccaggggaagaaatttattgtcataaagctgat
gaagaaatggcagaagcagcttttgtgattaaccaaattagaaatttagagcatcaaaac
ccggaattaaattggggtaactttgcaattttatatcgaacaaatgctcaatctcgacct
tttgaagaattattagtaaaatatcaaattccttatacggttgtgggaggcatgaaattt
tatgatcgcaaagaaattaaagatgctgtggcatatttaagggcgattaataacccagcg
gatactgtaagtttattaagagttatcaacacacctcgacggggaattggtaaatctact
gttgatgctttggtgaatgcttcccagcagttaggaacaacattatgggaaatattaagt
gatgaaacatctgtaaatactttagcaggacgttcggcgaaagctgtgaataatttcgcc
gccatgattcaaaatcgtcaagaacaagtcaaagttgttcccggttcggaaattttacaa
ggcattttagaagattctcgttatattaaggaattgcaagatcaagctacagatgaagct
gataatagaattagtaacgtcaatgaattatataatgctatgctgcaatttcaagaagaa
aatgctggagaagatatttctttacaggcatttttgcaaagtgcggctttgagttctgat
ttagataatttaaaagagggacaaacagcggtttctttaatgactttacacgcttctaaa
gggttggagtttcctgttgtctttttagtgggattagaacagggactttttccgggttat
cgttctttacaagatccttcattgttagaagaggaacggcgtttgtgttatgtgggaatt
acccgcgctcaagaacggttgtttttatctcatgccagagaacggcgtttatatgggtct
agagaaccggcaatgcgatcgcaatttctcgatgaaatacccacagaattgttaaccacc
caaaataaagttacccggagttcgactaaaaccacttctgcaaccactagtaaacaaagc
actcccggaatttggcaagtaggtgacagagtattacataagtcctttggacttggggaa
attactcacgttttcggagaaggaaataaggtgtctgtagcgattaaattcctgagttta
ggacaaaaaattgtagaccccagagtagcccaattacaaaaagtctaa
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