Dolichospermum compactum: NIES806_17890
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Entry
NIES806_17890 CDS
T10125
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dcm Dolichospermum compactum
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcm03016
]
NIES806_17890
Enzymes [BR:
dcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES806_17890
Transfer RNA biogenesis [BR:
dcm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES806_17890
Prokaryotic type
NIES806_17890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAZ85586
UniProt:
A0A1Z4V247
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All DBs
Position
1847958..1848914
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AA seq
318 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQILRSDLKVSQLSRIFI
THMHGDHIFGLMGLLASCGLAGNVDKIDIYGPSGLNEYLQAASRYSHTHFSYPIKVHTVQ
PGVIYENDEFTVSCGLLHHRIPAFGYRVTEKDRTGRFDIEKAKALEIPSGPIYGQLKRGE
TVTLEDGRVINGSELCGPTEIGRKIAYCTDTVYCNGAVQLAEDADVLIHEATFAHQDSEM
AFQRLHSTTTMAAQTAHIAGVRKLIMTHFSPRYAPGNIIELKDLLKEAKAIFPKTIMAHD
FMVYDVPRRREIESNVSA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgcagattacattcttagggacgagttcaggtgtaccgacaagatcacgcaacgtttcc
agcgtagcactgagattgccacaacgggcagaactgtggttatttgactgtggggaagga
actcaacatcaaattttgcgaagtgacttaaaagttagccaactatcccgaatttttatc
acccatatgcacggtgatcatattttcggcttaatgggattgctggctagttgcggttta
gcaggtaatgtagacaaaattgatatttatggtccatcgggattaaacgaatacttacaa
gccgcttctcgctactctcatacccatttttcctaccccattaaagtgcatactgttcag
ccgggggtaatttatgaaaatgatgaatttacagttagctgtggtcttttacatcaccgt
attcctgcttttggctaccgagtaacagaaaaagacagaaccggacgttttgatatagaa
aaagccaaagccttagaaattccttcaggtccaatttatggacaactcaagcgcggtgaa
acagtcaccctggaagacggaagagtaattaatggtagtgaattatgtggaccaacagaa
attgggcgaaaaattgcctattgtacagatacagtttattgtaacggtgcagtgcaatta
gcagaagatgcagatgtgttaattcatgaagccacgtttgctcatcaagattcagaaatg
gcttttcaaaggctacattctacaactacaatggcagcccaaacggcacacattgcagga
gttcgtaaactgattatgacacattttagccctcgttacgctccaggtaatatcattgaa
ttaaaagatttacttaaagaagcaaaagcaatttttcctaaaacaattatggctcatgat
tttatggtttatgatgttcctcgccgacgtgaaattgaatcaaatgtaagtgcatga
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