Dolichospermum compactum: NIES806_21770
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Entry
NIES806_21770 CDS
T10125
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
dcm Dolichospermum compactum
Pathway
dcm03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
dcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES806_21770
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NIES806_21770
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BAZ85972
UniProt:
A0A1Z4V373
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Position
2272591..2275533
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AA seq
980 aa
AA seq
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MSENLAASLNDVLPNAHNSQNTIRIRGARQHNLKNIDLELPRDRLIVFTGVSGSGKSSLA
FDTIFAEGQRRYVESLSAYARQFLGQLDKPDVEAIEGLSPAISIDQKSTSHNPRSTVGTV
TEIYDYLRLLYGRAGEPHCPICDRSIAPQTIDQMCDRIMELPDRTRFQILAPVVRGKKGT
HRKLISGLAAQGFVRIRVNGEVRELSDSIELDKNNTHTIELVIDRLVKKDGIQERLVDSL
ATCLKQSNGIVTIEVLKDTFDKIALERPDSKYIATEAENQGISEQELPKEMVFSENFACP
EHGAVMEELSPRLFSFNSPYGACPHCHGIGTLRRFSPELVVPNPDSPMYAAIAPWSEKEN
SYYLELLYAVGLNYGFELQTQWGKLTPEQQKVVLYGEENKKNTEEKKQGFKGVIPILQRQ
YEGGTELVKQKLEEYLIDQPCEVCGGKRLKPEALAVKLGQYGILDFTSVSIRECRERIEK
LKLSDRQTQIADLVLREVKARLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGSGL
TGVLYVLDEPSIGLHQRDNGRLLKTLTKLRDLGNTLIVVEHDEETIRAANYIVDIGPGAG
IHGGNIISEGSLENLLNAEESLTGAYLSGRRVINTPVKRREGNGRALTIKNAHRNNLQNI
DVEIPLGKLVSVTGVSGSGKSTLINELLYPSLQHHLLKKAPLPKDIDEIKGLNCVDKAIV
IDQSPIGRTPRSNPATYTGVFDIIRDVFSQTTEAKTRGYKPGQFSFNVKGGRCEACSGQG
VNVIEMNFLPDVYVQCEICKGARYNRETLQVKYKDKSISDVLNMTVEEALDFCQNIPKAV
TRLQTLFDVGLGYVQLGQPATTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYD
VHKLLDVLQRLVDKGNSILVIEHNLDVIRCSDWVIDLGPEGGDKGGEMIAAGTPEEVAKN
PRSYTGQYLQQVLAQYPAVG
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatctagctgcttctttaaacgatgtgcttccaaacgctcacaatagccag
aatactatccgcattcggggcgctaggcagcataatctgaaaaatattgatttggaattg
ccccgcgatcgcttaattgtctttactggcgtttccggttcgggtaagtcttctttggcg
tttgataccatttttgccgaaggtcaacgccgttacgtagaatccctcagtgcctatgct
cggcaatttttgggacagttggataaacctgatgtggaagccatcgaaggtttaagtccg
gcaatttccattgaccaaaaatcaacttcccataatccccgttcgacggtggggacggtg
acggaaatttatgattatttgcggttgttatacggtcgcgctggtgaaccccattgtccc
atctgcgatcgctctattgcccctcagaccattgaccagatgtgcgatcggatcatggaa
cttcccgaccgtacccgcttccaaattttagcccctgtagtccggggaaaaaagggaact
caccgcaaattaatttctggtttagccgcccaaggatttgtccgcattcgggtaaatgga
gaggtgcgagagctatctgattccattgagttagataaaaataacacacatactatagaa
ctggttattgatagattagttaaaaaagatggtattcaagagcgtttggtagattctctg
gcaacttgtcttaagcaatctaacggaatcgtcacaattgaagtattaaaagatacattt
gataaaatagcgctggagcgacctgatagtaagtatatagcaactgaggcagaaaatcaa
ggtatttcagaacaagaattacccaaagaaatggtattttcggaaaactttgcttgtccc
gaacatggtgcggtaatggaagaattatccccccgattgttttcttttaattccccttat
ggtgcttgtcctcattgtcatgggattgggactttaagaagattttccccggaattggtt
gtacctaatccagattcgccaatgtatgcagcgatcgcaccttggtcagaaaaagaaaac
tcatattatttggaattgctgtatgctgtcggcttaaattatggctttgaattacaaact
caatgggggaagttaacacccgaacagcaaaaagttgttttgtatggagaagaaaacaag
aaaaatacagaagagaaaaagcagggtttcaaaggtgttattcccattttacaaagacag
tatgaagggggaacagaattagtcaaacagaagttggaagaatatttaattgaccaaccc
tgcgaagtttgtggtgggaaaagattaaaacccgaagccttagctgtgaagttaggacaa
tatggaattttagattttaccagtgtttctattcgagaatgtcgggagaggatcgaaaaa
ttaaaattgagcgatcgccaaacccaaatcgccgatttagttctccgagaagttaaagcc
agattacaatttttattagatgtaggcttagattacctcaccttagatcgtcccgccatg
acattatcaggtggagaagcccaacgcattcgattagccacacaaatcggttcaggacta
acaggagttctttacgttttagacgaacccagcatcggtttacatcaacgagataacgga
cgattactcaaaaccttaaccaaattacgcgacttaggaaataccttaatcgtcgtcgaa
catgacgaagaaactatccgcgccgctaactatatagttgatattggtcctggtgccggc
attcatggcggaaatattatttccgaaggcagtttagagaatttattaaatgcagaagag
tctttaactggtgcttacctatcaggaagaagagtcatcaatactccagtcaaaagaaga
gaaggaaatggtcgcgccttaactattaaaaatgcccatcgcaacaacctacaaaatata
gatgtagaaattcccttgggaaaacttgtttccgttacaggagtttccggttcaggaaaa
tctaccttaattaacgaattactttatccatccctacaacatcatctcctcaaaaaagct
cctttgcccaaagatatagatgaaatcaaaggtttaaactgtgttgataaagccattgtc
attgaccaatcacccataggtagaactccccgttccaaccccgcaacctatacaggagtt
ttcgatattattcgtgatgttttttcccaaaccacagaagccaaaaccagaggatacaaa
cctggacaattttcttttaatgtcaaaggtggacgatgcgaagcttgtagtggacaaggt
gtaaatgtcatcgaaatgaactttttacctgatgtttatgtgcaatgtgaaatttgcaaa
ggtgcgagatataaccgcgaaactctccaagttaaatataaagataaatcaatttccgat
gttttgaatatgacagttgaagaagcattagatttttgtcaaaacattcccaaagccgta
acgagattacaaacattatttgatgttggtttgggttatgtgcaattaggacaaccagcc
acaaccttatccggtggagaagcccaacgggtgaaattagccacagaattatctcgacgt
gccacaggaaaaacactttatttaatagatgaaccaaccacaggattatctttttatgat
gttcataaattattagatgttctccaaagattagtagataaaggcaattccattttagtc
attgaacataatttagatgtgattcgttgttccgattgggtcatagatttaggaccagaa
ggtggagataaaggtggagaaatgattgcggcaggaacaccagaagaagtggcgaaaaat
ccccgttcttatactggtcaatatttacagcaggtattggcacaatatccagcggtgggg
tga
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