Dolichospermum compactum: NIES806_28940
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Entry
NIES806_28940 CDS
T10125
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dcm Dolichospermum compactum
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcm03009
]
NIES806_28940
Enzymes [BR:
dcm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NIES806_28940
Ribosome biogenesis [BR:
dcm03009
]
Prokaryotic type
ribosomal protein modification factors
NIES806_28940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
AHD
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
BAZ86678
UniProt:
A0A1Z4V5C9
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All DBs
Position
complement(3046798..3048153)
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AA seq
451 aa
AA seq
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MVEKPTIAISHLGCEKNRIDTEHMLGLLVNAGYGVDSNEEVADYVIVNTCSFIEAARQES
VKTLVELAEANKKIVITGCMAQHFQEQLLEELPEAVAVVGTGDYHKIVDIIERVEQGERV
KEITAEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVA
EAQQLASQGVKEIILISQITTNYGLDIYGKPKLAELLRALGKVDIPWIRMHYAYPTGLTP
DVIAAIQETPNCLPYLDLPLQHSHPEILRAMNRPWQGQINDGIMERLKIALPSAVLRTTF
IVGFPGETEAHFQHLLEFTKRHKFDHVGVFTFSPEEGTPAYNLPNQIPAEVMTERRNQLM
ELQQPISFQKNQQEVGKIVDVLIEQENPEGGELIGRSGRFSPEVDGQVYVKGEARLGTIV
KVAIESADAYDLYGQVINSDRLSSYLLSAVV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaagccaacaattgccatttctcacctgggctgtgagaaaaatcgaattgat
acagaacatatgctaggactgctagtaaatgcaggctatggcgtagatagtaacgaagaa
gtagcagattacgtaattgtcaatacctgtagttttatcgaagcggctcgacaggaatca
gtaaaaaccctagtagaactagcggaagccaataaaaaaatcgtcattactggctgcatg
gcacaacactttcaagaacaattattggaagaattgccagaagcagtagcggtagtgggg
acaggggattatcacaaaattgttgatatcatcgagcgagtagaacagggagagagagtt
aaagaaattactgccgaacctacctatattgccgatgaaaccacaccccgttatcggaca
accactgaaggagtagcttacctgcgagtggcagaaggctgtgattatcggtgtgcattt
tgtattattccccatttgcgaggaaaccagcgatcgcgtaccattgaatcaatagtcgcc
gaagcccaacaactggcaagtcaaggtgtcaaagaaataatactcatttcccaaatcacc
accaattacggcttagatatttacgggaaacccaaattagccgaattgctgagggcatta
ggcaaagtagatatcccttggattaggatgcactacgcctatcccaccggactcacacca
gatgtaattgctgccatccaagaaacccccaactgtttaccatatttggatttgcctctc
caacattcccatccagaaattctccgcgccatgaatcgtccttggcaagggcaaattaat
gatgggattatggaacggctgaaaattgccctaccatcagcagtgctaagaaccacattt
atagttggttttcctggagagacggaagcacattttcaacatttattagagtttacaaaa
cgacataaatttgatcatgttggtgtcttcaccttctcaccagaagaaggaactcccgcc
tacaatctacccaatcaaattccagcagaagtgatgacggaacgccgtaatcaactaatg
gaattacaacagccaatttccttccagaaaaatcagcaggaagtcggcaaaatagttgat
gtcctgattgagcaagaaaatcctgaaggtggagaattaatcggtcgttccggcagattt
tctcccgaagttgatggtcaagtctatgttaaaggagaggctaggctaggaaccatcgtc
aaagtagcaattgaaagtgccgatgcctatgacctctatggtcaagttatcaatagtgat
agattatcttcctatctgctatctgctgttgtataa
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