Dolichospermum compactum: NIES806_32710
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Entry
NIES806_32710 CDS
T10125
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dcm Dolichospermum compactum
Pathway
dcm03420
Nucleotide excision repair
dcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES806_32710
03430 Mismatch repair
NIES806_32710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcm03400
]
NIES806_32710
Enzymes [BR:
dcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES806_32710
DNA repair and recombination proteins [BR:
dcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES806_32710
MMR (mismatch excision repair)
Other MMR factors
NIES806_32710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DUF3138
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAZ87053
UniProt:
A0A1Z4V6K8
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All DBs
Position
complement(3484345..3486624)
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AA seq
759 aa
AA seq
DB search
MTNDQSPLTKLTENIATIRAQLRPGQTQMADWRGGALAVSAVPGAGKSTGMAAAAAIAIA
CQYEDYLNTGNQDYKQLIVVTFTRSATANIKLKIRENLKKLSLPQTGFAVYTLHGLALII
ASRHPHLSGLQLENATLITPNQSHKFIRTAVEQWIANYPEIYLRLLAGKQFDGEETEKLR
RQSALRTEILPDLAYTVIHEAKSSGISPADLLKWSEQTHNKYDILRIAAGLYEQYQKIMQ
LQDFIDYDDMILGALKVLRNPSTCRIEQNKVFAVFEDEAQDSSPLQTDLLEILASQEYAD
KLDKSALNLIRVGDPNQAINSTFTPADPIYFREFCEDCQIQDRLAQMDQAGRSTQIIIDA
ANFALEWVNNQDFAKTQHRQAPFRNQKIQPVNQENGNPQPVGQGLELHTPRDIHHTVELL
SQRVIELFTENPQACAAILVRENRQGRWLAAALEPICKEHKIKLYDVGEKERRSHVPQEI
LSLLQFCDRPHSPDYLKATLEVLVERQLIPTQDINTLASLPEEFLYPGPLATPQTEIVQK
AAHLCRSLLRAYLELPFYQIISFLALTLKYDQAELATADKLAERVNQQIFGNSSMGAMIS
TLSEIVNSERFESVEPENVEAQYTKAGQLTIITMHKAKGLDWDYVFLPFLHENLIPGRFW
IPPQGQFLGDFTLSEVARAQIRAGLHKKPIPDINQAWEESKYLKIAEEYRLLYVAMTRAK
RLLWMSAAQKAPFTWSKPENLQTSAPCPVFTALKRQFSR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgaccaatcaccactgactaaattaacagagaatatcgccaccattcgcgcc
cagcttcgcccaggacaaacacaaatggcggattggagagggggagcattggctgtgtct
gctgtgcctggggcgggcaaatctacggggatggcggcagcagcagcgatcgccattgct
tgtcaatatgaggattatttaaatactggtaatcaggattataaacagttaattgttgtt
acttttacccgttctgccactgctaatattaaacttaaaattcgggaaaacttaaaaaaa
ttatctttaccacaaacaggatttgcagtttatactttgcatggtttagctttaattatt
gctagtcgtcatcctcatttatcgggtttacaattagaaaatgcgactttaatcacacca
aatcaaagtcataaattcattcgcacagcagtagaacaatggattgctaattatccagaa
atttatctacgcttacttgcaggaaagcaatttgatggagaagaaaccgaaaaactccgt
cgtcaatcggcgctgcgaacggaaatattaccagatttagcttatacggtgattcatgaa
gccaaaagttcgggaatatcgccagcagatttattaaagtggagtgaacaaactcataat
aaatatgacattttaagaatagccgctggattatatgaacaatatcaaaaaatcatgcag
ttacaagactttattgattacgatgatatgatattaggggctttaaaagttttgcgaaat
cctagcacctgccgcattgaacaaaataaagtttttgctgtttttgaagacgaagctcaa
gattctagtcctttacaaacagatttattagaaatactcgctagtcaagaatatgcagat
aaattagataaatcagctttgaatttaatcagagttggtgatcctaatcaagccattaat
tctacatttacacctgctgacccgatttattttcgggaattttgcgaagattgtcaaatt
caagatagactagcccaaatggatcaagctgggcgcagtacgcaaataattattgatgca
gctaactttgctttagaatgggttaataatcaagattttgccaaaactcaacatagacaa
gcaccatttagaaatcagaaaattcaaccagtcaatcaagaaaatggcaatcctcaacct
gtgggacagggtttagaacttcatacccctagagatattcatcatacagttgaattactt
tcccaaagagtaattgagttatttaccgaaaatccccaagcttgtgcagcgatattagtg
agagaaaatcgccaaggacgatggttagctgcggctttagaaccaatatgtaaagaacat
aaaataaaactttatgatgtaggagaaaaagaacgccgttctcatgttcctcaagaaatt
ctatcattattgcagttttgcgatcgcccccattcccccgattatctcaaagctacctta
gaagtccttgtagaacgacaattaattcctacccaagatattaacactctagctagttta
cctgaagaatttctatatccgggtcctttagccacaccccaaacagaaatagtccaaaaa
gccgctcatctttgtcggagtttacttagggcttatttagaattaccattttatcaaata
atttcttttttggccttaaccttaaaatatgatcaagccgaattagccactgcggataaa
cttgcagaacgggtaaatcagcaaatttttgggaatagttctatgggggcaatgatctca
actttaagtgaaattgtcaattccgaaagatttgaatctgtagaaccagaaaatgtagaa
gcacaatataccaaagccggacaattaacaattatcaccatgcacaaagccaaagggcta
gactgggattatgtatttttgccttttctccatgaaaatttaattcctggacgcttttgg
attcccccccaaggacagtttttaggtgattttactttatcagaagttgcccgcgcccaa
attcgtgccggacttcacaaaaaacccataccggatattaaccaagcctgggaagaatca
aaatacctgaaaattgctgaagaatatcgtttactttatgttgccatgactagagccaaa
agactcttatggatgtctgcggctcaaaaagcaccttttacttggagtaaaccggagaat
ttacaaacatcagccccttgtccagtttttacagctttaaaacggcaattttctcggtga
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