Dolichospermum compactum: NIES806_35310
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Entry
NIES806_35310 CDS
T10125
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dcm Dolichospermum compactum
Pathway
dcm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES806_35310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcm03021
]
NIES806_35310
03400 DNA repair and recombination proteins [BR:
dcm03400
]
NIES806_35310
Enzymes [BR:
dcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES806_35310
Transcription machinery [BR:
dcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES806_35310
DNA repair and recombination proteins [BR:
dcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES806_35310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HlyD_3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAZ87309
UniProt:
A0A1Z4V7K3
LinkDB
All DBs
Position
complement(3745120..3746064)
Genome browser
AA seq
314 aa
AA seq
DB search
MAQFQIECVESNAEESRSYYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTSVTAVRIAE
VSHEFATVPGVREDVLEILMRMKDVILKSYSSQPQIGRLLVHGPATVTVAHFDLPSEVEV
IDPTQYIATIAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSV
EEARGDGSLKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLEPTDTGSDIPDD
PTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQRR
LGITLPQERSSKPS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtctaatgctgaggaaagtcggagctattac
agtaagttcgttctagaacccctagagcgcggtcaagggacaactgttggcaacgcgttg
cggcgagttttactttctaacttggaagggacatcagtgacagcagtgagaattgctgaa
gttagtcatgagtttgcaacagttccaggggtaagggaagacgtactggaaatcctcatg
cgaatgaaggatgtcattcttaagagttattcttctcaaccccaaattggtcgtttactt
gtgcatggaccagcaacagtaactgtggcacatttcgatttacctagtgaagtagaagtg
attgacccgactcagtatatcgccaccatcgctgagggtggaaaactggaaatggaattt
cggattgagcgaggcaaaggctaccggactgtagaacgaggcagagaagaagccacatct
ttggattttctccaaattgactcagtgtttatgcccgtgcgaaaggttaactatagtgtt
gaagaagcccgtggcgatggctctttgaaagatcgacttcttttggaagtatggactaat
ggtagtatttctcctcaagaagcactatcatctgctgctggaattttggtagatttattt
aacccattaaaagatatctccttagaaccaacagacacgggttcagatatcccagatgat
cccaccgcccaaatccccattgaagagctacagttatctgttagagcttataactgttta
aaacgcgcccaagtaaattccgtagccgacttattggattacacccaagaagacctgtta
gaaatcaaaaactttggtcaaaagtcagcggaagaagtagtggaagctttacagcgtcgc
ttaggtattaccttacctcaagaaagaagctctaagcccagctaa
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