Dolichospermum compactum: NIES806_42110
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Entry
NIES806_42110 CDS
T10125
Name
(GenBank) DNA photolyase, FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dcm Dolichospermum compactum
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcm03400
]
NIES806_42110
Enzymes [BR:
dcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NIES806_42110
DNA repair and recombination proteins [BR:
dcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NIES806_42110
Prokaryotic type
NIES806_42110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAZ87978
UniProt:
A0A1Z4V956
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All DBs
Position
4551436..4552872
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AA seq
478 aa
AA seq
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MSDLILFWHRRDLRISDHTGLAAAREKSAKIVGVFCLDPQILASDDIAPVRVKYMIGCLQ
SLQERYQQAGSQLLILQNDPVIAIPKLATALKAKAVFWNWDVEPYSQTRDLAVIEALKTQ
GIEFLNDNWDQLLHSPTEIFSGAKTPYTVYTPFWKNWITKSKAKPVETLANLENLTAEEQ
EISQLTGTINLPSAADLGFIWDAELIISPGELVAQEKLDNFAKSAINEYQEQRNFPAIDG
TSQLSAALKFGVIGMRTIWQTTIEALANGNSEEVNASIQTWQKELAWREFYQHAMYHFPE
LAKGAYRDTFKTFPWQNNEKYFQAWCEGKTGYPIVDAAMRQLNETGWMHNRCRMIVASFL
TKDLIINPQWGEKYFMQKLIDGDLSANNGGWQWSASSGMDPQPLRIFNPASQTQKFDAEA
EYIRQWIPELRYVSPEYLVTGKIPLLDYYGTNYQQPIVDHKQQQALFKQLYQQQKVIG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaattctgttttggcatcgtcgagatttacgcatttctgatcatacagga
ctagctgcggctagagaaaaaagtgcgaagattgtaggtgtattttgtctagatcctcaa
attctcgcaagtgatgatattgcccccgttagggtaaaatatatgattggctgtttgcaa
tctctccaagaaagatatcagcaagcaggtagtcaattattaattttacaaaatgatccc
gtgattgcaattcccaaattagcaacagcattaaaagcaaaagctgtattttggaattgg
gatgttgaaccctattcccaaacacgagatttagctgtaattgaagctttgaaaactcaa
ggaattgaatttcttaacgacaattgggatcagttattacattcaccaacagaaattttt
agtggtgcgaaaactccctatactgtttatacccctttttggaaaaattggattactaaa
tctaaagctaaaccagttgaaactttagcaaatctagaaaatttaacagcagaagaacaa
gagatttctcaactcacaggaactattaatttaccttctgccgcagatttaggttttatt
tgggatgcagaattgataatttctcccggagaattagtagcacaagaaaagttagataat
tttgccaaatctgctattaatgaatatcaagaacagcggaattttcccgcaattgatggt
acatctcaattaagtgccgctttaaagtttggtgttattgggatgagaactatttggcaa
actactatagaagcactggcaaatggtaacagtgaagaagtaaatgccagtatccaaaca
tggcaaaaggaattagcatggcgggaattttatcaacatgctatgtaccattttccagaa
ttagctaagggtgcatatagagacacttttaaaacattcccttggcaaaataatgaaaag
tattttcaggcttggtgtgaagggaaaacaggttatcctatagtagatgccgccatgcgt
caattaaatgaaaccggctggatgcacaacagatgtagaatgattgttgccagttttttg
actaaagatctaattattaatccccaatggggagaaaaatattttatgcagaaactcatt
gatggtgatttatctgctaataatggaggctggcaatggagtgcttctagtggtatggac
cctcaaccattacggatttttaaccctgccagtcaaacccaaaaatttgatgccgaagcg
gaatatattcgtcagtggatacctgaattgcgttatgtatctccagaatacttggtaact
gggaaaattcccctgttagattactatggcacaaattaccagcagccaatcgttgatcat
aaacaacagcaagctttgtttaagcaattatatcaacaacaaaaggttattggatga
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