Dolichospermum compactum: NIES806_45330
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Entry
NIES806_45330 CDS
T10125
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dcm Dolichospermum compactum
Pathway
dcm03030
DNA replication
dcm03430
Mismatch repair
dcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES806_45330
03430 Mismatch repair
NIES806_45330
03440 Homologous recombination
NIES806_45330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcm03032
]
NIES806_45330
03400 DNA repair and recombination proteins [BR:
dcm03400
]
NIES806_45330
Enzymes [BR:
dcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES806_45330
DNA replication proteins [BR:
dcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES806_45330
DNA repair and recombination proteins [BR:
dcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES806_45330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAZ88296
UniProt:
A0A1Z4V9Q3
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All DBs
Position
4885934..4888561
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AA seq
875 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPELVDRAIALGMKAIALTDHGVMYGAVELIKICRNKNVK
PIIGNEMYILNGEIDKQERRPKYHQVVLAKNTKGYKNLVKLTTISHLQGVQGKGIFSRPC
INKDLLKQYREGLIVTSACLGGEIPQAIMSNRPDAARKVAKWYKDVFGEDFYLEIQDHGS
QEDRIVNVEIIKIARELGIKFIATNDSHFISCFDVESHDALLCIQTGKLISEDKRMRYSG
TEYLKSAEEMYQLFRDHLPDDIIAEAIATTVEIADKVEPYHIMGDPQIPTPTIPSGHTAD
TYAEEVAWLGLLERLNRKSRHEVDPVYKERLEYELKMIQQMGFSTYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMKITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDKRDQV
IDYVTEKYGVDRVAQIITFNRLTSKAVLKDVARVLDIPYGDSDKMAKMIPVVRGKPTKLK
VMISDETPEPEFKAKYDNDPTVRRWIDMAMRIEGTNKTFGVHAAGVVISAEPLDELVPLQ
RNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTLIQKTIDLIEQSKGYKIDPDQITGQER
KAQKILAKGDHTNLPKDVAKAYSLLEAGDLEGIFQLESSGMKQIVRDLKPSNIEDISSIL
ALYRPGPLDAGLIPKFINRKHGREEIEYDTQILEPILNETYGIMVYQEQIMKIAQDMAGY
SLGQADLLRRAMGKKKVSEMEKQKQNFIDGSAKNGVVSQVSEHLFGDMLKFAEYCLSYDT
EILTVEYGFLQIGEIVEKQIECKVYTVDSNGILYTQSIAQWHNRGQQEVYEYLLENGAII
RATKDHKFMTEEGQMLPIDEIFAQGLDLLQVGVSE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttcctttacatattcacagtgattacagcttgcttgatggtgctagtcaa
ctaccagaattagtagatcgagcgatcgcactaggaatgaaagcgatcgccctcacagat
catggtgtcatgtatggcgcagttgaactgatcaaaatctgccgcaacaaaaacgttaag
ccaataattggcaacgaaatgtatattttaaacggtgaaattgacaaacaagaacgccgt
cccaaatatcatcaagtcgtattagctaaaaataccaaaggttataaaaatttagttaaa
ttaaccacaatttctcaccttcaaggtgttcaaggtaaaggcattttttcccgtccttgt
attaataaagatttactcaaacaatatcgggaaggtttaatagttactagtgcttgttta
ggaggagaaattccccaagcaattatgagtaatcgtccagatgcagccagaaaagttgct
aaatggtataaagatgtatttggtgaagatttttatttagaaattcaagatcatggttct
caagaagaccgaattgtgaatgtagaaataatcaaaattgccagagaattaggaattaaa
tttatcgccaccaacgactcccattttatctcctgttttgatgtagaatcccacgatgcc
ttgttatgtattcaaacaggtaaactcattagcgaagataaaagaatgcggtatagcggc
acagaatacctcaaatcagcagaagaaatgtaccagctattccgtgaccatttacccgat
gatatcattgccgaagcgatcgccacaacggtcgaaattgccgataaagtcgaaccttat
cacatcatgggagatccacaaattcccacacccacaatcccttcaggacatacagcagat
acttatgcagaagaagttgcctggttgggacttttagaaaggttaaatcgcaaatctcgc
cacgaagtagatccagtctataaagaaagattggaatatgaattaaaaatgattcaacaa
atgggattttctacctactttttagtagtgtgggactacatcaaatttgcgcgagataat
aacattcccgttggtccaggacgtggttctgcggctggttctttggtagcctatgccatg
aaaattacgaatattgaccccgtgcatcatggcttactatttgaacgatttctcaatcct
gaacggaaatcaatgccagatattgatacagatttctgcattgataaacgagatcaagtt
attgattatgtaactgaaaaatatggtgttgatagagttgctcaaatcattacctttaac
cgtctcacatccaaagcagttttaaaagatgtcgctagagtattagatattccctatggg
gattctgacaaaatggcgaaaatgattcctgtagtccggggtaaacctactaaactaaaa
gtgatgatttccgatgaaacacccgaaccagaatttaaagccaaatatgataatgatccc
actgtccggcgctggattgatatggctatgcgaattgaaggaactaacaaaaccttcggt
gtccatgctgccggtgtggttatttccgcagaaccattagacgaacttgttcctctacaa
cgcaataatgatggttctgtaattactcaatatttcatggaagatttagagtcattggga
ttattaaaaatggactttttgggtttgcggaatctaaccctaattcaaaaaaccattgat
ttaattgaacaaagtaaaggatataaaatcgatcctgatcaaattaccggacaagaaaga
aaagcacaaaaaatactagctaaaggtgatcatactaacttaccaaaagatgttgctaag
gcttattcattattagaagctggtgatttagaaggaatatttcaattagaatcttcagga
atgaaacagatagttagagatttgaaaccttcaaacattgaagatatttcttcgatttta
gcattgtatcgtccaggtccattagatgccggattaattcctaaatttattaatcgtaaa
cacggacgagaagaaattgaatatgatactcaaattttagaaccaatcttaaatgaaacc
tacggaatcatggtttatcaagagcaaattatgaaaattgctcaagatatggctggttat
agtttaggacaagctgatttactccgtcgcgctatgggtaaaaagaaagtatcagaaatg
gagaaacaaaaacaaaattttattgatggttctgccaaaaacggtgtagtatcccaagtt
tctgaacatttatttggggatatgttgaagtttgctgaatattgtttaagttacgacaca
gaaattttaactgttgaatatggttttttacaaattggggaaattgttgaaaaacagatt
gaatgtaaagtttatactgttgatagtaatggaatactttatactcagtcaattgcccaa
tggcataatcggggacaacaagaagtttacgaatatttattagaaaatggcgcaattatt
cgcgctacaaaagatcataaatttatgactgaagaagggcaaatgttaccaattgatgag
atttttgcccaaggattggatttgttacaagtgggtgttagtgaataa
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