Dolichospermum compactum: NIES806_45500
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Entry
NIES806_45500 CDS
T10125
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dcm Dolichospermum compactum
Pathway
dcm00900
Terpenoid backbone biosynthesis
dcm01100
Metabolic pathways
dcm01110
Biosynthesis of secondary metabolites
Module
dcm_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dcm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NIES806_45500
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcm01006
]
NIES806_45500
Enzymes [BR:
dcm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NIES806_45500
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NIES806_45500
2.5.1.29 geranylgeranyl diphosphate synthase
NIES806_45500
Prenyltransferases [BR:
dcm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NIES806_45500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3439
Motif
Other DBs
NCBI-ProteinID:
BAZ88313
UniProt:
A0A1Z4VA85
LinkDB
All DBs
Position
complement(4901522..4902460)
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AA seq
312 aa
AA seq
DB search
MVATDKRLETPKKSESASFNLATYLKERQQLCEQALDNSITVVYPEKIYEAMRYSLLAGG
KRVRPILCLATADMIGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKV
YGEDVAILAGDGLLALAFEHVATQTPANVPRDRVLQVIIRLGKALGAAGLVGGQVVDLES
EGKSDISLETLNFIHNHKTAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDD
ILDITATQEQLGKTAGKDLTAQKVTYPSLWGIEESRAKAQQLVAEACAELESYGEKAIPL
QALAHFITSRNH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaacggataaaagattggaaaccccaaaaaaatcagaatcggctagttttaac
ctcgctacctatctcaaagaacgacaacagctttgcgaacaggctttggacaactccatt
accgtcgtttatccagaaaagatttatgaagccatgcgctactcactcttagctggaggt
aaacgagttcgtcctattctctgtctcgccactgctgacatgattggtggcacaatagaa
atggccatgcctacagcttgtgccgtagaaatgattcataccatgtccttgattcatgat
gatttacccgcaatggataacgatgattaccgtcgcggtaaactcaccaatcataaagtt
tatggtgaagatgtcgctattttggcaggagatggtttattggctttagcctttgaacac
gtagccacccaaactcctgcaaatgtacccagagatagagtattacaagtcatcattcgc
ctgggtaaagcattaggcgcggctggcttagtcggtggtcaggtagtagatttagaatcc
gaaggtaaatccgatatttccttagaaaccctgaattttattcataatcataaaacagca
gccctgttagaagcttgcgtagtttgtgggggaattattgctggtgcatccgctgaagat
gtgcaaaaattaacgcgttattctcaaaatattggtctggctttccaaatcattgatgat
attctagatatcactgctacccaagagcagttgggtaaaaccgctggtaaagacctgaca
gcccagaaagtcacctaccctagtctatggggaattgaagaatctcgcgccaaagcccaa
caactggttgctgaagcttgtgctgaattagaatcctatggtgaaaaagccattcctttg
caagcgctcgcccactttatcaccagtcgcaatcactaa
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