Dyadobacter chenwenxiniae: MUK70_02220
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Entry
MUK70_02220 CDS
T08907
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dcn
Dyadobacter chenwenxiniae
Pathway
dcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK70_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcn03019
]
MUK70_02220
03009 Ribosome biogenesis [BR:
dcn03009
]
MUK70_02220
Enzymes [BR:
dcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUK70_02220
Messenger RNA biogenesis [BR:
dcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUK70_02220
Ribosome biogenesis [BR:
dcn03009
]
Prokaryotic type
rRNA helicases
MUK70_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
UBA_7
Phage_TAC_8
Cas3-like_C_2
HTH_CLF_N
Motif
Other DBs
NCBI-ProteinID:
UON83813
LinkDB
All DBs
Position
complement(544304..546079)
Genome browser
AA seq
591 aa
AA seq
DB search
MTTENFETFEELGLSENILKALTEMGFTKPSPIQAQGIPAVMQGSDVIGQAQTGTGKTAA
FGIPVLERIDVSSNAVQALVLCPTRELAVQVSEEIGRLAKYIKGLRIEAIYGGDSIDRQI
RSLKKGVHIVVGTPGRVMDHMERKTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPS
DRQTILFSATMSKPIMSITKRFQTDPILIKVVRNELTNVNIEQVYFEVKPQAKVEVMTRL
IDMHHLKSLLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTIL
VATDVAARGIDVSGLDGVINFDIPLDEEYYVHRIGRTGRAGLSGKAFSLVARDEKYRLKT
IESFTKVKIEKGVIPSYEDIVGVRKARFVESISATIQEGDDQELFGDVLEMLQHAGYSTE
QVVGAMAKQIMGVQKNEYADANLAWEERRGERDGRREGGSDRFERRPSSGGRFGDRRESA
PRGNDRYAPAARGESRPRSEGSRDESKRSATPEAGMTRLFLSLGRKDHILPKDIVGAIAG
EANIPGKTIGAIDIYDKFTFVDVPERDARAVLRAMDGNTIKGKPVQIDIAK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaatttcgaaactttcgaagagcttggcctctcagaaaacatccttaaa
gcccttactgaaatgggttttactaaaccctcacccatacaggcacaaggaattccggca
gtaatgcagggatctgacgtgatcggacaagcacaaacaggaacaggaaaaacggcagcg
ttcggtatccctgtactggaaagaattgacgtatccagcaatgctgtacaagcactggtt
ctatgcccaacccgcgaattagcggtgcaggtttccgaagaaattggccgtttggctaaa
tatattaaaggcctgagaattgaagctatctacggtggtgattcaattgatcgccagatc
cgttcccttaaaaaaggcgttcacattgttgtaggaactcccggtcgcgtaatggaccat
atggagcgtaagacgttgaagtttgacgaagtacgcatgatggtgcttgacgaagcggat
gaaatgcttgatatgggtttccgtgaggatatcgaaagcattctggcagatatgccgtct
gaccgtcagacgattttgttctcagcaacaatgtctaagccgatcatgtcgatcacaaaa
cgtttccaaactgatcctattttgatcaaagtggttcgtaatgagcttactaacgtcaac
attgagcaggtttactttgaagtgaagccacaggctaaggttgaagtaatgacgcgtctg
attgacatgcaccatttgaaatcactgcttgttttttgtaataccaaaagaaaagtagac
gaaattgttgaagatcttcaattgagaggttatgcttcggaaggaattcacggcgatttg
cgccagcagcaacgtagcaatgtaatgagcaagttcaaggcgggtgttaccaccattctt
gtagctacggacgttgcagcacgcggaattgacgtaagcggactggatggcgtgatcaac
ttcgatatcccattggacgaagagtattacgtacaccgtatcggccgtacaggtcgtgcc
ggtttgtccggaaaagcattctcactggttgcccgcgatgaaaaatatcgtttgaaaacc
attgaaagttttacaaaagtaaaaattgaaaaaggcgttattccttcttatgaagatatc
gtcggcgttcgcaaggctcgttttgttgaaagcatttctgcaactatccaagaaggtgac
gatcaggagcttttcggcgatgtgcttgaaatgttgcaacacgcaggttactctactgag
caggttgtaggcgcaatggcgaagcagatcatgggcgttcagaaaaacgaatatgccgat
gctaaccttgcctgggaagaaagacgcggcgaacgtgacggacgcagagaaggcggaagt
gacaggttcgaacgtcgtccatccagcggcggacgttttggagatcgcagagaaagcgct
ccacgcggaaacgaccgttatgcacctgcggcacgcggtgaatctcgcccaagatcagaa
ggcagccgcgacgaatcaaaacgttcggcaacaccggaagccggtatgactcgtttgttt
ttgagccttggccgcaaagatcacatcttgccaaaggatatcgtaggagccattgctggc
gaagcgaacattccaggtaaaacgatcggtgcgattgacatttatgacaaattcactttt
gtagacgttcctgagcgtgatgcccgtgcggttttgcgtgccatggacggcaacaccatt
aaaggtaagccggtacaaattgatatcgctaaataa
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