Dyadobacter chenwenxiniae: MUK70_15670
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Entry
MUK70_15670 CDS
T08907
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dcn
Dyadobacter chenwenxiniae
Pathway
dcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK70_15670 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcn03021
]
MUK70_15670 (rho)
03019 Messenger RNA biogenesis [BR:
dcn03019
]
MUK70_15670 (rho)
Transcription machinery [BR:
dcn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUK70_15670 (rho)
Messenger RNA biogenesis [BR:
dcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUK70_15670 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
ATPase_2
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
UON80514
LinkDB
All DBs
Position
3669669..3671576
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AA seq
635 aa
AA seq
DB search
MPTIDELNIKLLSELKEIAGNLGVADYAKLPKKELINRILLKQEPVPATEASTASEPVNN
TPEAAPVDPTASDSDGYNSDEPKKKRARRPAENAAGDTMKPANNRPANANNRSARMKKDS
ASQVPSPAPLFDTSLRNQRPDINDRPKNLDIREEADSDSDTLNDLGKEEIVSQPEEVTPV
NEEVAQEKHETTIEEAAAIAKEEKQNRQPNQQNQPNEGNDRQSQQPQQPNEANDRQSQQP
QQPAHRDDPSSKIKRNYNNYVREFDGLIVNEGVLEIMQDGGYGFLRSADYNYLASPDDIY
VSPSQIKLFGLKTGDTVRGQIRPPKEGEKYFALLRVETVNGKTTEEIRDRIPFEYLTPLF
PEECLKLSSRPDQYSTRILDLFAPIGKGQRGMIVAQPKTGKTVLLKEIANAITRNHPEVF
LLILLIDERPEEVTDMQRSVRAEVIASTFDEQADRHVKVASIVLEKAKRMVECGHDVVIL
LDSITRLARAYNTVVPSSGKILSGGVDANALHKPKRFFGAARNVENGGSLTIIATALIDT
GSKMDEVIFEEFKGTGNMELQLDRKLSNKRVFPAIDVMASGTRREDLLLDKETLKKVWIL
RKHMSDMNAMESMDFLLEHMKGTRSNEEFLISMNR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaattgatgaattgaacattaagcttttatcagagcttaaagaaatagctggc
aaccttggtgttgcggattatgctaaactccctaagaaagaattgattaacagaatcctg
cttaaacaggaacctgtaccggctaccgaagcatccacagcttccgagcccgttaacaat
acaccggaggcagccccggttgatccgacggcctcagattcggatggttataactccgac
gagccaaagaaaaaaagagcacgaaggccagccgagaacgctgccggggatacgatgaaa
cctgcgaacaacaggccggcaaatgcaaataacaggtcggcaagaatgaaaaaagacagt
gcatcgcaagttccttcacctgctcccctatttgatacttccctgagaaatcagcgtccc
gatataaatgaccgaccaaagaatttggatatccgtgaagaagcggattctgacagcgat
acgctgaatgatttgggcaaagaagaaattgtgagtcaacccgaggaagttacgcctgta
aatgaggaagttgctcaggaaaaacatgaaacaaccattgaagaagctgctgcgattgcg
aaagaagaaaagcaaaaccgccagccgaaccaacaaaatcagcctaacgaaggaaacgac
cgtcaatcgcagcaacctcaacagcctaacgaagcaaacgaccgccaatcgcagcaacct
caacagcctgcccaccgcgacgatccgtcttcgaaaattaagcgcaattacaacaactac
gttagagagtttgacggactgatcgttaacgaaggtgtccttgaaattatgcaggacggc
ggctacggtttccttcgctcggcagattacaattacctggctagtcctgatgatatatac
gtttcgccttctcagatcaagctttttggtttgaaaaccggtgataccgtgcggggacag
attcgcccgccgaaagaaggtgaaaaatattttgcgttgcttcgtgttgaaacagttaac
ggtaagacaacagaggagatcagggatcgtattcctttcgaatatcttacgccgcttttc
ccggaagaatgtttaaaactaagctcacgtcctgatcaatattctacaaggatcctcgat
ctgtttgctccgatcggaaaagggcagcgcggaatgatcgttgcgcagcccaaaacaggt
aaaactgttttgttaaaagaaattgcaaacgccatcacgcgcaaccatccggaagttttc
cttttgatcctgctgatcgacgaacgtccggaagaggttacggatatgcagcgcagcgtg
agagctgaggtgattgcttctacatttgatgagcaggcagaccgtcacgtgaaagttgcg
agcattgttttggaaaaagccaaaagaatggttgaatgtggtcatgacgtggttatcctg
ctggattctatcacgcgtcttgcccgtgcatataacacagtggttccttcatccggtaaa
atcctttcaggtggtgtggatgccaatgcattgcataagccaaagagattctttggagcg
gcgagaaatgttgaaaatggcggatcactgacgattattgccacggcgctgattgataca
ggttctaaaatggacgaagtaatctttgaagagttcaaaggaacgggtaacatggaattg
cagctggatcgcaagctttccaacaaacgtgtattccccgctatcgatgtgatggcatcg
ggtacgcgtcgtgaagatttgcttttggataaagaaacattgaaaaaagtgtggatcctt
agaaaacacatgtccgacatgaatgctatggaatctatggacttcttgcttgaacatatg
aaaggcaccagaagcaacgaggaattcctgatctccatgaaccgctaa
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