Dyadobacter chenwenxiniae: MUK70_22105
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Entry
MUK70_22105 CDS
T08907
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dcn
Dyadobacter chenwenxiniae
Pathway
dcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUK70_22105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcn03019
]
MUK70_22105
Enzymes [BR:
dcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUK70_22105
Messenger RNA biogenesis [BR:
dcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUK70_22105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Acyltransferase
UvrD-helicase
PAC2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UON81752
LinkDB
All DBs
Position
complement(5180425..5181762)
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AA seq
445 aa
AA seq
DB search
MQTTQNKFEQFKLNRQLLNAIEEAGYTEPTPIQEQAIPLALSGQDILGIAQTGTGKTAAY
TLPLLMRIKFAQGEHARALIMAPTRELAMQISEAITQLSKYTDIRTVVLFGGVGAKSQIE
AIRKGVDIIVATPGRFMDLYFQEEVIVKHLNVMILDEADKMMDMGFMPQIRKLLEIIPRK
RQNMLFSATFSDKVEKLSFEFLEFPTRIEVTPQATTAEMVTQSLYELPNFRTKINLLTHL
LKDREAFNRVLIFTRSREVAGLVHQNLLNVVVREDELKVIHANKGQNTRTNAMEAFKEGS
VRVMVATDVVARGIDITDVSHVINFDVPLIYEDYVHRIGRTGRANRIGQAITFMTMADEY
HIQKIEKMIRMEIPRKELPEDLEIAATPVTERQDMLREIDNQKRREDPTFLGAFHEKKKT
YRPAQKTPAKGGQNRRNSSGRSKRK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcagactacgcaaaacaaatttgagcaattcaagcttaaccgtcaattactcaatgcc
attgaagaagcgggatacaccgagccgacgcctatccaggaacaagccatcccgctcgca
ttgtcaggacaggacattctgggcatagcccaaacaggaacaggcaaaacagccgcctat
acattaccgttattaatgcgcatcaaatttgcccagggcgagcacgccagggcattgatt
atggctcctacgcgtgagttggcgatgcaaatttcggaagccattacgcaactgagcaaa
tacacggacatcaggacggtagtgctttttggtggagtaggagccaagtcgcagatcgag
gcgatccggaaaggcgttgatattatcgttgccacgcctggaaggtttatggacctttat
tttcaggaagaggtcattgtaaagcatttgaatgtaatgatcctggacgaggccgacaaa
atgatggatatgggcttcatgccgcaaattcgcaagttgctcgaaatcattccgcgaaaa
cggcaaaatatgcttttctcagccacattctcggataaagtagaaaagctttccttcgaa
tttcttgaatttccaacgcgcattgaagtaacgccgcaggccacaacggccgaaatggtg
acgcaatctctttacgaattgcccaatttccgcaccaaaatcaatcttttgacccatttg
cttaaagaccgggaagcattcaaccgcgtcctgatttttaccagaagccgcgaagttgca
ggattggtgcaccagaatctcctgaatgtggttgtgcgtgaggacgaattaaaagtaatc
catgcaaacaaaggccaaaacaccagaaccaatgcaatggaagcattcaaggaaggttcg
gtgcgcgtcatggtggcaacggatgtggtggcgcgagggattgacatcacggatgtaagc
cacgtgatcaactttgatgtgcctttgatctatgaagattatgtgcaccggatcggaaga
acggggcgcgcaaaccgcattggtcaggccatcacttttatgacgatggcggacgagtat
cacattcagaaaattgaaaaaatgatccgcatggagatcccgcggaaggaattgccggag
gatctggaaattgccgcaacgcccgttacagagcgccaggacatgcttcgggagatcgat
aatcagaaaaggagagaagatccgaccttcctcggagcattccacgagaagaaaaaaaca
tatcgcccggcgcaaaaaacgcccgcaaaaggaggccaaaatcgccgtaattcatcgggc
agaagtaaacgcaaataa
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