Dyadobacter chenwenxiniae: MUK70_24680
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Entry
MUK70_24680 CDS
T08907
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dcn
Dyadobacter chenwenxiniae
Brite
KEGG Orthology (KO) [BR:
dcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcn03009
]
MUK70_24680 (rimO)
Enzymes [BR:
dcn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MUK70_24680 (rimO)
Ribosome biogenesis [BR:
dcn03009
]
Prokaryotic type
ribosomal protein modification factors
MUK70_24680 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UON82229
LinkDB
All DBs
Position
complement(5769032..5770342)
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AA seq
436 aa
AA seq
DB search
MKTKGIVKNKVNIVTLGCSKNLVDSEVLYTQLKGNGFTVDHESKKDDSQIVVINTCGFID
NAKEESINTILRYADAKAAGMVDKVYVTGCLSHRYKDELSVEIPTVDAWFGTNELPRLLK
TLKADYKHELVGERLLTTPTHYAYLKIAEGCDRPCSFCAIPIMRGGHVSRSIEELVKEAK
SLAKRGTKELILIAQDLTYYGLDIYKKRNLSDLLAQLSDVEGIEWIRLQYAYPAGFPMDI
LDIMNERSNICKYLDMPLQTGSTEILKSMRRGITREKTEALIETIRAKVPDITLRTTLIV
GHPGETEALFDETYDFVEKMRFDRLGAFQYSHEDNTHSYTMPDDIPAEIKQERADAIMEL
QQGISYELNQQKIGNTYKVLFDRKEGGHFIGRTEFDSPEVDNEVLVPASQYVRLGDFAQV
NITSAEEFDLYGSVIS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaatagttaaaaataaagtcaacattgtcacgctgggctgctccaaa
aatctggtggattcggaagtgctctacacgcagctcaaaggcaacggattcaccgttgat
catgagtctaaaaaagatgattcgcagattgttgtaatcaacacttgcggatttattgat
aatgccaaagaagaatccatcaacacaattctgcgctatgctgatgcaaaggcggccgga
atggttgataaagtttacgttacaggctgtttatcacatagatacaaagatgagctttcc
gttgaaatcccgactgtggacgcctggtttggaactaatgaactgccacgactgctcaaa
acgctcaaagcggactataagcatgaactcgtcggcgagcggttgctgaccacgcccaca
cattacgcttacctaaaaattgccgaaggttgcgatcgtccatgcagtttctgcgcgatc
cccattatgcgcggcggccacgtttcccgttcgattgaggagcttgtgaaggaagcgaaa
tccttggcaaaacgcggcacaaaagaacttatcctcattgctcaagacctgacttactat
ggtcttgatatttataaaaaaagaaatctatccgacttacttgcgcaactttctgacgta
gaaggcattgagtggatcaggttacaatatgcttatccggctgggtttccaatggacatt
ctggatatcatgaacgagcgcagcaacatttgcaaatatctggatatgcctctgcagacc
ggctcaacagaaatcctgaaatccatgcgacgtggcattacacgtgaaaaaacggaagca
ttgatcgagaccatccgcgcaaaagtgccggatattacattgagaacaacattaatagtt
ggtcacccgggagaaacggaagcgctgtttgatgagacttacgattttgttgaaaaaatg
cgcttcgaccgtttgggggcatttcagtattctcacgaagacaacacgcattcctacacc
atgccggacgacattcctgccgaaatcaagcaggaacgcgcagatgccattatggagctg
caacaaggcatttcctatgaattgaaccagcaaaaaatcggaaatacttataaagtgctt
ttcgaccgcaaagaaggcgggcacttcatcggccggaccgaatttgattcaccggaagtt
gataatgaggttcttgtgcctgccagccaatatgtgcgattaggtgactttgcccaggtt
aacattacatccgctgaggaatttgacttgtacggatcggttatttcctga
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