Dermatophilus congolensis: SAMEA4475696_0747
Help
Entry
SAMEA4475696_0747 CDS
T05038
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dco
Dermatophilus congolensis
Pathway
dco03420
Nucleotide excision repair
dco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4475696_0747 (pcrA_1)
03430 Mismatch repair
SAMEA4475696_0747 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dco03400
]
SAMEA4475696_0747 (pcrA_1)
Enzymes [BR:
dco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4475696_0747 (pcrA_1)
DNA repair and recombination proteins [BR:
dco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4475696_0747 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4475696_0747 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
Mu-like_Pro
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
SNV19592
UniProt:
A0A239VBR4
LinkDB
All DBs
Position
1:832763..835354
Genome browser
AA seq
863 aa
AA seq
DB search
MSNLFENVPFEALGDVAPKGPVTASDVDGAGGRVPAPQESPDRDLGGVRRPEGRSVFDAA
ALVEGLNEPQKQAVLHEGGRLLIVAGAGSGKTRVLTHRIAYLLGARGVQPGQILAITFTN
KAAGEMRERVEQLVGGRARAMWVSTFHSACVRILRREADKIGMKSGFSIYDAADSQRLMA
LVMRELNIDTKRHTPRSFAHRISNLKNELIDSDEFASQARSEGAEVIEGIVADVYSEYQR
RLRQANAFDFDDLIMVTVHMLQAFPEVAEYYRRRFRHIMVDEYQDTNHAQYALVRELASP
IPEKPADPEKGLLSQPRVPGAELVVVGDSDQSIYAFRGATIRNINEFEQDYPEATTIVLE
QNYRSTQTILSAANAVISQNSERRPKKLWSEGGAGSKIVGYVADSEHDEAAFVARRIERL
MKSESVKPHEVAIFYRTNAMSRALEEVLVRTGLPYKVIGGTRFYERREVKDVLAYLRTIA
NPMDTVNLRRILNVPKRGIGDRAEALVADFADRERIAFVEALGRADEIPMMAKRSANAVR
SFTTLLEALRNILEDGVGVAGLVEAILEQSGYLDELRGSKDPQDETRLDNLAELVSVARE
FDEERESRRSEAQAVAHEEAVADALAQGQDLPAETMSAETMADSPLAELTEFLERVSLVA
DSDDVPDEAVAAGGAEAQASGEYEGAVTLMTMHTAKGLEFPVVFVVGMEDGTFPHFRAFE
SSHEMEEERRLAYVGITRARERLHVSRAVVRSAWGTPKYNPPSRFLSEIPQELVEWERTE
SAVSGDLRAAPSVATLSSASRMRPVANRPIIALAPGDRVTHDSFGLGRVVQIEGEGDRTI
AHVDFGESKVKRLLLRYAPLEKL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgttcgagaatgtgccttttgaggctctgggcgatgttgcgccgaaaggg
cctgtaactgcgagtgacgtggatggagctgggggacgtgtgcctgctccgcaggagtca
cctgatcgtgatttggggggtgtgaggcgtcctgaggggcgttcggtgtttgatgctgcc
gcgttggtggaggggttaaacgagccgcagaagcaggcggttttgcatgagggtgggcgg
ttgttgatcgttgctggtgctggttcgggcaaaacgagggttttgacgcatcgcattgcg
tatttgttgggtgctcgtggtgtccagccggggcagattcttgcgattactttcaccaac
aaggctgctggtgagatgcgtgagcgggttgagcagctggtgggtggtagggcgcgggcg
atgtgggtgagcacgtttcactctgcgtgtgtgcgtattttgcggcgtgaggccgacaag
atcggcatgaagagcggtttttctatttacgatgctgctgatagccaacgtttgatggcg
ttggttatgcgtgagctgaatattgacactaaacggcatactccgcgcagttttgctcac
cggattagtaacttgaaaaatgaattaattgattcggatgagttcgcttctcaggctcgt
tctgagggtgcagaggtcattgaaggaattgttgctgatgtgtactcggaatatcagcga
aggctgcgtcaggcgaacgcttttgatttcgatgacctcatcatggtgacggttcatatg
ttgcaagctttcccagaggttgctgaatattaccgacgccggttccggcacattatggtg
gatgagtatcaggatacgaaccatgcccagtatgcattggtgcgggagctggcttctcct
atcccggagaagcctgctgatcccgaaaaaggattactgtcgcaaccccgggttcctggg
gctgaattagttgtcgtgggtgactctgatcagtcgatttatgctttccgtggggcaact
atccgaaacatcaatgaatttgaacaagattaccctgaggccaccacgattgtccttgag
cagaactatcgttctacgcagactattctttctgcagctaatgctgttatttcgcaaaac
agtgagcgtcgcccgaagaagttgtggagtgagggtggcgcggggtcaaaaattgttggt
tatgtagcagattctgagcacgatgaggctgccttcgttgcacggcggatcgagcggctt
atgaagagcgagtctgtgaaaccgcacgaagttgctatcttttatcgcactaacgcgatg
tcgcgtgctcttgaagaggttttggtgcggactgggcttccgtacaaagttattggtggg
actcgtttctatgagcgccgcgaggtaaaagatgtcttggcgtatttgagaacaatcgct
aatcccatggatacggttaacttgcgccgcattcttaatgttcccaagcgtggtattggt
gaccgtgctgaagcgcttgttgctgatttcgctgatcgtgagcgcattgcgtttgttgag
gcgttggggcgtgctgatgaaatcccgatgatggcgaaacgctctgcgaatgcggttcgt
tcgttcactactttgttggaggcgctccgcaatattttggaagatggagttggcgtagct
ggattggtcgaggcgattcttgaacagtcgggatatcttgacgagctgcgtggaagtaaa
gatccacaggatgaaactcgcttggataaccttgcggagcttgtttcggtggcgcgggag
ttcgatgaagaacgcgaaagtcggcggtctgaggcccaggccgttgcacatgaggaagcg
gtcgcggatgcgttagcccaagggcaagacctaccggcggagacgatgtcagcagagact
atggcggatagtcctttggctgagctgactgagttccttgagcgggtttcgttggtagca
gattcggatgatgtcccagatgaagcggttgctgcagggggtgcagaagcgcaggcttcg
ggtgagtatgagggcgcagtcacgttgatgaccatgcacacggcgaaagggttggagttc
cccgtggtgtttgtggtcgggatggaggatgggacgttccctcatttcagggcttttgaa
agttcccatgagatggaagaggagcgccgtctggcttatgtgggcattacgcgcgcgagg
gaacggttgcatgtatcgcgggctgttgttcgttctgcgtgggggaccccgaaatacaat
ccgccttcacggttcctttcggagattccgcaggagttggtggagtgggagagaacagag
tctgctgtaagtggggatttgcgtgcggctccgtcggtggccacgttgtcttcggcgtcg
cggatgaggccagttgcgaaccgaccgattattgcgctggctcccggtgatcgggtaacg
cacgattcgtttggtctagggcgtgtggtccagatcgaaggtgaaggtgatcgcacaatt
gcgcacgttgacttcggtgagagcaaagtgaagaggctgttgctgaggtatgcgccgtta
gagaagctgtga
DBGET
integrated database retrieval system
