Dermatophilus congolensis: SAMEA4475696_1647
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Entry
SAMEA4475696_1647 CDS
T05038
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dco
Dermatophilus congolensis
Pathway
dco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA4475696_1647 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dco03400
]
SAMEA4475696_1647 (ruvB)
Enzymes [BR:
dco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4475696_1647 (ruvB)
DNA repair and recombination proteins [BR:
dco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4475696_1647 (ruvB)
RecFOR pathway proteins
SAMEA4475696_1647 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
AAA
RuvB_C
AAA_5
TIP49
AAA_16
Mg_chelatase
Sigma54_activat
AAA_14
nSTAND3
AAA_22
RNA_helicase
Zeta_toxin
AAA_3
TsaE
AAA_18
NTPase_1
AAA_33
Sigma54_activ_2
NPHP3_N
IstB_IS21
Rad17
AAA_17
AAA_25
NACHT
NB-ARC
AAA_19
AAA_28
Motif
Other DBs
NCBI-ProteinID:
SNV22771
UniProt:
A0A239VKC4
LinkDB
All DBs
Position
1:1861628..1862785
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AA seq
385 aa
AA seq
DB search
MSPLGEHSADPWDDGSYDASPRIVDPSAHVDETGDERQIEAALRPKRLAEFPGQRRVRDQ
LGLVIEAAKRRASSPDHILLSGPPGLGKTTLAMIVASELGAPIRITSGPAIQHAGDLASI
LSSLTEGEVLFLDEIHRMARPAEEMLYLAMEDFRVDIIVGKGPGATAIPLELAPFTVVGA
TTRAGLLPAPLRDRFGFTGHLDFYDSGELLAIVRRSANLLDVEATDEGLAQIADRSRGTP
RIANRLLRRVRDWAQVHGSGVLDADAACAALELFDVDSRGLDRLDRAVLDALCRRFGGGP
VGVATLAVAVGEEPDTVETVAEPFLVREGLMVRTARGRVAASAAFEHLGIPVPDNPALSM
PGAQRNSGSVPTVENDQGGSGIGRL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctttaggagagcactcggcagacccgtgggacgacggctcgtatgacgcatca
ccacgcatcgttgaccccagcgcacacgtggatgaaaccggtgacgaacgccagatcgaa
gctgcgctacgcccgaaacggcttgcggagttccctggtcagcgtcgcgtccgtgaccag
ctaggccttgttattgaagctgctaagcgtcgggcctccagcccggaccacattctttta
tctgggccgccggggctgggtaaaaccacgcttgccatgatcgtggcctctgagcttggc
gcccctatccgtattacgagcgggccagctatccagcacgctggggacttggcttccatc
ctgtcgtcgctgaccgaaggggaagtgcttttcctcgacgaaattcatcgtatggcccga
cccgctgaggaaatgctctatctagcgatggaggacttccgtgtcgacatcatcgttggg
aaaggcccaggcgctacggcaattccgttggagctggcacctttcactgtggtgggggcc
accacgcgggctggtttgctgcccgctcctttgcgtgatcgtttcgggtttactgggcat
cttgatttttatgacagtggcgagctccttgccattgttcgcaggtcagcgaatcttctt
gatgtcgaggcaactgatgaaggtcttgcccagatagctgaccgctcacgtggcacccct
cggatcgctaatcggcttttgcggcgggtgcgtgactgggcacaggtgcatggaagcggt
gtgctcgatgctgatgctgcttgtgcggcgttggagttgtttgacgttgacagtcgcggg
ttggatcgtcttgaccgtgctgtgctggatgcgttgtgtcgtcgttttggaggtggacct
gttggggtcgcgacattagctgtcgcggtgggggaagaaccagacactgttgagaccgtt
gcagaaccattcctggtacgcgagggactcatggtgcgtacagcacgtggtcgggttgct
gcttcagcggcctttgagcatttaggaatccctgttcctgataatccggcactgtctatg
cccggtgcgcaacggaactcaggatcggttccaaccgtcgagaatgatcaaggcggctca
ggtataggacggctatag
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