Dermatophilus congolensis: SAMEA4475696_1737
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Entry
SAMEA4475696_1737 CDS
T05038
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dco
Dermatophilus congolensis
Pathway
dco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4475696_1737 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dco03019
]
SAMEA4475696_1737 (recQ_1)
03400 DNA repair and recombination proteins [BR:
dco03400
]
SAMEA4475696_1737 (recQ_1)
Enzymes [BR:
dco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4475696_1737 (recQ_1)
Messenger RNA biogenesis [BR:
dco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMEA4475696_1737 (recQ_1)
DNA repair and recombination proteins [BR:
dco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA4475696_1737 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SNV23121
UniProt:
A0A239VLC7
LinkDB
All DBs
Position
1:complement(1961027..1963156)
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AA seq
709 aa
AA seq
DB search
MSGAARSIPWQGPASEVISRLAGPGARLRDDQAEAVAALSHDGARVLVVQATGWGKSAVY
WCATAARRAAGGGATLVLSPLLALMRDQIEAARRAGLNAVTLNSSNVDEWSAVEGQLAAG
EVDVLLISPERLAHPTFGRRVLSALMGNMGLLVIDEAHAVSDWGHDFRPDYRRIAQVMAR
LDAQVPVLATTATANARVTQDVAAQLGEATTVLRGPLGRDSLQLAVVPPMSALQRYAWVA
QMLPVLPGSGIVYALTIADAQRATCAVQAVHGVDYPVAMYTGQLEAAERALLEDKLRRNE
VKALIATSALGMGYDKPDLGFVVHMGAPPSPVSYYQQVGRAGRGIEHALVALLPSAADEP
VWRHFATATLPDEGMARRVLDALDTAEPQSVPALEAVTGLRRSRVELLLKQLAVDHVTER
TPQGWVATGVPWRYDADHYAAIVRMREREAAIMRDYVQGRSCLMELLRTSLDDPQGGPCG
QCSVCLGGLPGPLVPAADPAVTAVVAEQLRSIDHQLPARKMWPGGQFGRRGRIPAGEMVL
EGRVVIDMDAPQWCEVFEACLQAPGDAPRELCEAAVGVLRRWSASWPQRPSLICSLATLA
HPQGPYPVAGQVAAYLGEVGRIEVGHWLVRPPVSEVGERPAGGAEAALWQEAIAAAPPPQ
LSGGGGVAGRDVLLVVDRSASGWPITLAGAGLRRWGAGSVQPLLLHRCP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggggcggcccggtcgatcccgtggcagggccctgccagtgaggtgatttctcgc
ctggctgggccgggtgcgcggctgcgtgatgatcaggccgaggctgttgctgcgttgtcc
catgatggggcacgggtgctggttgtgcaggcaactggttggggtaagtcggcggtgtat
tggtgcgctacagctgcgcgtcgcgccgccggcggtggggccacgttggtgttgtcgccg
ctgttggcgttgatgcgtgaccagattgaggcggctcgtcgtgctgggttgaacgcggtg
acgttgaacagttcgaacgtggatgagtggtccgcggtggaggggcagttagctgctggt
gaggtggatgtgttactcatctcgccggagcggttggctcatccgacgtttggtcggcgg
gtgttgtcggcgttgatgggcaacatgggtttactcgtcattgatgaggcgcatgctgtt
tctgactgggggcatgatttccgcccggattatcgccgtatcgcgcaggtgatggcgcgg
ctggatgcccaggttccggtgcttgcgaccacggcgacagccaatgcgcgtgtcacacag
gatgttgcagcccagctgggtgaggcgacaacagttctgcggggcccgttgggtcgggat
agtctccagttggcggtggttccgccgatgtctgcgttgcagcggtatgcgtgggtggcg
cagatgctgccggtgttgccggggtcggggattgtgtatgcgttgacgattgctgatgcg
cagcgcgctacctgcgcggttcaggctgtgcatggggtggactatccggtggcgatgtat
acggggcagctcgaggcggctgagcgtgcgttacttgaggacaagctgcgccgtaatgag
gtcaaagctctcatcgctaccagtgcgttagggatggggtatgacaaaccggatttgggg
tttgttgttcatatgggggcgccaccgtctccggtgtcttactaccagcaggttgggcgt
gccgggcgcggtattgagcatgctcttgtcgcgttgttgcccagcgcggctgatgagccg
gtgtggcgtcatttcgcgacggcgacgttgcctgatgagggtatggcgcgccgggttctt
gatgctcttgatactgctgagccgcagtcagtgcctgcgttggaggcggtaactgggttg
cgtcggagccgggtggagttgctgcttaaacagttagcggttgaccacgtgactgagcgg
accccgcagggctgggtggccacaggtgtgccgtggcggtatgacgctgaccattacgcc
gccattgtgcggatgcgtgaacgtgaagcagcgatcatgcgtgactatgtgcagggtcgt
tcgtgtttgatggagttgctgcgtaccagcctggatgatccgcaaggcgggccgtgcggg
cagtgttcggtgtgtctgggtgggttgcctggtccgttggtgccggccgcggatccggcg
gtgacggccgtggttgctgagcagctacggagcattgatcatcagctgcctgctcggaaa
atgtggccgggtgggcagttcgggcggcgcgggcgaatcccggcgggggagatggtcctt
gaaggccgtgtcgttatcgatatggatgccccgcagtggtgtgaggtgtttgaggcgtgc
ctgcaagctccgggcgatgctccgcgtgagttgtgtgaggcggcggtgggggtgcttcgg
cggtggagcgcttcgtggcctcagcgcccaagtcttatctgctcgttggcgacgttagcg
cacccgcagggcccttatccggtggcgggtcaggttgcggcgtatctgggtgaggtgggg
cggatcgaggtggggcattggctggtcaggcccccggtgagcgaggtgggggagcgccct
gctggtggggctgaggccgcgttgtggcaggaagcgatcgcagcagcgccgcccccgcag
ttatctggtgggggcggtgtcgctggccgggatgtgttgcttgttgttgatcgcagcgcc
tctgggtggccgattacgttggctggtgcggggcttcggcggtggggagctgggtcggtg
cagcctcttttgctgcaccggtgcccgtga
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