Dermatophilus congolensis: SAMEA4475696_1755
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Entry
SAMEA4475696_1755 CDS
T05038
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
dco
Dermatophilus congolensis
Pathway
dco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SAMEA4475696_1755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dco03400
]
SAMEA4475696_1755
DNA repair and recombination proteins [BR:
dco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SAMEA4475696_1755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Saf4_Yju2
GCOM2
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
SNV23190
UniProt:
A0A239VN47
LinkDB
All DBs
Position
1:complement(1980043..1981206)
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AA seq
387 aa
AA seq
DB search
MRAMWKGAVSFGLVTVPVRLYSATENHDLKFHQVRKSDGSRIKYKRVAEADGAQVDYKDI
AKGYETADGRTVVITDEELEALPSRSSREISVEKFVPAEQIDPILFDKAYYLEPDPTAVK
PYALLRETLRTSERMAVATISVRTRLTMAVLRVHGEVIVCQTLLWPDEVREPDFEVLNNA
PAPKRAEMKMATMLIESMAENFEPNEYEDDYTSAVEALVQTKLDGAQVKQAVTEHESPAQ
VVDLLAALQRSVDRAKAARAGSGGAASDLGTAQRSESKPAKGTNTAKTKSAKKSTKKSQK
SAKKSQKTTQSTAKKSAATKPAKKTAGKPKSTKAKTSTAASTKTAARKAQLNTPSHSTAT
TPATRQMCWHSPELLSRWEFLPLRVTA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatgtggaaaggggctgtttcgttcggcctggtcacggtgccggttcggcta
tacagcgccacagaaaatcatgacctgaaatttcaccaggtgcgcaaaagcgatggctcc
cgcatcaaatacaaacgcgttgccgaagccgatggcgcccaagtcgactacaaagacatc
gccaaaggatatgagaccgccgatggccgcacggttgtgatcaccgacgaagagcttgaa
gccttgcctagccgaagcagccgggaaatctcagtagagaaattcgtcccagctgaacaa
attgaccccatccttttcgataaggcctactacctcgaaccagaccccacagcagtcaaa
ccgtatgccctgctgcgggaaacactgcgcacaagcgaacgcatggcagtagcgactatc
tcggtgcgcacacgactgacaatggctgtgttgcgagtacatggcgaggtgattgtgtgc
cagacattgctgtggcccgatgaggtacgtgaaccggatttcgaggtgcttaataacgcc
cccgcacccaagagggcggaaatgaaaatggccacgatgctcatcgagtcgatggctgaa
aacttcgaaccgaatgagtacgaagacgactacacgtctgcggtggaagcactggtgcaa
accaaacttgatggcgctcaagtgaagcaggccgtcacagagcatgaatcaccagcccaa
gtggtggatttgttggcggcgttgcagcgttcagtggatcgcgccaaagctgcccgggca
ggcagcgggggtgctgccagtgatttgggtacggcgcagcgctccgagagtaaaccagcc
aaaggcaccaacacagcgaagacgaagagcgcgaaaaagtcgacgaagaagtctcaaaag
tcagcgaagaaaagccagaaaaccacgcaaagcacagcgaagaaatcagccgccacgaag
ccagcgaaaaagacggctggaaagccaaagtccaccaaggcgaaaacatctacagcagca
tctacgaaaacagctgcgcgtaaagcgcagctgaacaccccctcacactccactgcaacc
accccagcgactcgccaaatgtgctggcactcaccggaattactctcccgctgggaattc
ttgccacttagagtgactgcatga
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