Dermatophilus congolensis: SAMEA4475696_1972
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Entry
SAMEA4475696_1972 CDS
T05038
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dco
Dermatophilus congolensis
Pathway
dco03420
Nucleotide excision repair
dco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMEA4475696_1972 (pcrA_2)
03430 Mismatch repair
SAMEA4475696_1972 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dco03400
]
SAMEA4475696_1972 (pcrA_2)
Enzymes [BR:
dco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4475696_1972 (pcrA_2)
DNA repair and recombination proteins [BR:
dco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMEA4475696_1972 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
SAMEA4475696_1972 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
SNV24058
UniProt:
A0A239VQW5
LinkDB
All DBs
Position
1:complement(2220262..2223627)
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AA seq
1121 aa
AA seq
DB search
MKIHYSANDIADALGRHHPTPEQAAVIEHPLESMLIVAGAGSGKTETMASRVVWLVANGL
VPAESVLGLTFTRKAAGELAERITRRLTAVRAAGLWIPYNDPNTPNDTTTDNDIVAPAVS
TYNAYAGRLVKEHGLRLGVEPDAGLLTEALAWQLADSCVTEYTGPMDAVEASPATVTAAI
LSLSGQLAEHLRTPHDLDTFLTATISDLDSIELAPKKRSLPTSIRKLRAHCAAQQQLLPI
LADYVRRKREHSVIDFADQVQLAAQLAINFPAVAATERRRFNIVLLDEFQDTSEAQMRLL
EALFARSSEEHPPPIPVVAVGDPHQSIYGWRGASATTLTRFPVLFGTHTQGTTTPAPTLP
LSISWRNDQAILAAANTVAAELTQHSTVQVHKLRPRPAAGPGRIHTGRWATAEEEATGTA
QWIARHWWDTSQPHPENEPPRSGRTAAVLCRRRAQFPLIIDALRKEGLPVEVVGLGGLLM
VPEITDLVALIASATDSSRSDKFMRLLAGPVCRLGVRDLDVLAAWARHRDRLMQETVDDQ
ETPAAETETKNDVPEGIDTRPEPSGLIEAVEDLPERGWKDNHGRELTSTARARLEWLSRA
LSQVREASSQSLPEMVMTAERVLGLEVELLSRPGATPESARAQLDAFAEVVAGFAAGSAT
ATPHALLSYLEAAADQERGLDMPAPASTGAVNVLTVHASKGLEWDVVAVPGLVEGGFPSY
PNPARVSFVGDQWQVQPPKDSAWTSDLGAIPYPLRGDANGLPQMDLRGVDSQGAQDALSD
FALAGGIHAMREERRLAYVAYTRAVEALLVSTAVWEGHKSPRVTSRFLSEVAQGSVVEEW
VDMPPEGAENPTVIDEQVVWPVSAPVSRSVEMEAVRLAMSAGGVVDGVDDLSIEMDVLVA
EWLAGRDGVREQVAVLPDHVTGTDLVRLRVDPEGFAVDLRRPMPRPPAVAARAGSQFHAW
VEARYRSQVSLLDCVSEGGVGDQEWAGFEVGDEVGDVQRWKENFLASEWADRQPLEVEFS
VETVIDGLPVRGRIDAVFARPGGGFEVVDWKTGRAPSAAQVESRSMQLALYRLAYAQLRG
VDVQEVGAAFFYAADGVTLRPAMPSRDELSAWVAGLGGGRG
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccactacagcgccaacgacatcgcagacgccctaggcagacaccaccccacc
cccgaacaagcagcagtcatcgaacaccccctcgaatccatgctcatcgtcgccggagca
ggatcaggaaaaaccgaaaccatggcctcccgcgtcgtctggctcgtcgccaacggactc
gtccccgccgaatccgttctaggcctcaccttcacccgaaaagcagccggagaactcgcc
gaacgcatcacccgccgcctcaccgccgtccgcgccgcaggactctggatcccatacaac
gaccccaacacccccaacgacaccaccaccgacaacgacatcgtcgctcccgccgtctcc
acctacaacgcctacgcaggccgcctcgtcaaagaacacggactacgcctaggcgtcgaa
cccgacgcaggactgctcactgaagccctcgcctggcaactcgcagactcctgcgtcacc
gaatacaccggccccatggacgccgtcgaagccagccccgccaccgtcaccgcagcaatc
ctctccctatcaggacagctcgccgaacacctccgcaccccccacgatctcgacaccttc
ctcaccgcaaccatcagcgacctcgacagcatcgaactggcccccaaaaaacgcagcctg
cccacctctatacgaaaactgcgagcacactgcgccgcacaacaacaactcctgcccatc
ctcgccgactacgtccgccgaaaacgcgaacactccgtcatcgacttcgccgaccaagtc
caactcgcagcccaactagccatcaacttccccgcagtcgccgccaccgaacgacgccgc
ttcaacatcgtcctcctcgacgaattccaagacacctccgaagcccaaatgcgtctactc
gaagccctcttcgcccgctccagcgaagaacaccccccacccatccccgtcgtcgccgta
ggcgacccccaccaatctatctacggatggcgtggagcaagcgcaaccaccctcacccga
ttccccgtcctctttggcactcatacacaaggaacaactacccccgcacccaccctgccc
ctatccatcagctggcgaaacgaccaagccatcctcgccgcagctaacaccgtcgccgcc
gaactcacccaacacagcactgtccaggtacacaaactccgtcccagaccagcagcagga
ccaggccgcatccacacaggccgctgggccaccgccgaagaagaagccactggcaccgcc
caatggattgcccgccactggtgggacacctcacaaccacaccccgagaacgaaccaccc
cgatcagggcgcaccgctgcggtgctatgccgccgcagagcacaattccccctcatcatc
gacgcacttcgcaaagaaggacttccggtagaggtagtggggctaggaggactactcatg
gtccccgaaatcaccgacctcgtagcactgatcgcctccgcgactgactcatcgcgatcg
gacaaattcatgcggcttcttgccggaccggtatgccgactcggggtacgcgatctcgac
gtattggctgcctgggcacgacaccgagaccgtcttatgcaggaaaccgtagatgaccag
gaaacacccgccgcagaaacagaaacaaaaaatgacgtcccagaaggtatcgacactcgc
ccggagccttcagggctgatcgaagctgtcgaagatcttccagaacgaggatggaaagac
aaccacggccgtgaattgacctcgacagctcgtgctcgtttggagtggctatcacgtgcg
ctgagccaggtgagggaggcctcgtctcaatctctcccagaaatggtgatgactgctgag
cgagtgcttggcctggaggtggagctgttgtctcgtcctggtgctactccagaatcggcg
cgtgctcagctagatgcgtttgctgaagtagtcgccggttttgccgctggttctgccaca
gcaacgccgcatgctctcttgtcgtacttggaggctgccgctgatcaagagcgagggctt
gacatgcctgcgccagcatctacgggagctgtcaatgtgttgactgtgcatgccagtaaa
gggctggagtgggatgtggtggctgttcctggtcttgtggagggcgggtttcctagttat
ccgaatccggcacgggtttcgtttgttggtgatcaatggcaggtgcagcccccgaaagat
tcagcgtggacgagtgatcttggtgcgattccgtatcccttgcggggggatgctaatggg
ttgccgcagatggatttgcgtggagttgattcgcaaggtgcgcaggatgcgttgtctgat
ttcgcgctcgctggggggatacatgcgatgcgtgaggaaagaaggttggcatatgtcgcc
tatacccgtgcggtggaggcgttgcttgtctcgacggcggtgtgggaggggcataagagt
ccgcgggtgacgagtcgatttttgagtgaggttgcgcaggggtctgttgttgaggagtgg
gtcgatatgccgccggagggggcggaaaacccgacggtgattgatgagcaggttgtgtgg
cctgtgtctgctccggtgtcgcgttctgttgagatggaggcggtgcgtttggcgatgagt
gctggtggggtagttgatggggtggatgatttgtcgattgagatggatgttttggtggct
gagtggttggccggtagggatggggtgcgtgagcaggtggcggttttacctgatcatgtg
acgggtactgatcttgtgcgtttgcgggtggatccggaggggtttgctgttgatttgcgg
cgtcctatgccgcgtccgcctgcggttgctgctcgtgcgggttcgcagtttcatgcgtgg
gtggaggcgcggtatcggtcgcaggtgtcgttgttggattgtgtgtctgagggtggtgtt
ggtgatcaggagtgggctggttttgaggtgggtgatgaggtgggtgatgtgcagcggtgg
aaggagaattttttggcgtcggagtgggctgatcggcagccgttagaggtggagttttcg
gtggagacggtgattgatggtttgccggttcgggggcggattgatgcggtgtttgcgcgg
ccggggggtggttttgaggttgtggattggaagacggggcgggctccgagtgcggcgcag
gttgagtctaggagtatgcagttggcgttgtatcggttggcgtatgcgcagttgcgtggg
gtggatgtgcaggaggtgggggcggcttttttctatgcggctgatggggtgacgttgcgt
cctgcgatgccttcgcgggatgagttgtcggcgtgggttgctggtttgggtggtggtcgg
gggtga
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