Dermatophilus congolensis: SAMEA4475696_2357
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Entry
SAMEA4475696_2357 CDS
T05038
Symbol
fliA
Name
(GenBank) Sigma-F factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
dco
Dermatophilus congolensis
Pathway
dco02020
Two-component system
dco02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA4475696_2357 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMEA4475696_2357 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dco03021
]
SAMEA4475696_2357 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dco02035
]
SAMEA4475696_2357 (fliA)
Transcription machinery [BR:
dco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMEA4475696_2357 (fliA)
Bacterial motility proteins [BR:
dco02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAMEA4475696_2357 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
HTH_3
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
SNV26002
UniProt:
A0A239VV28
LinkDB
All DBs
Position
1:complement(2600384..2601346)
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AA seq
320 aa
AA seq
DB search
MLQSIWSDSGFVTVSDENQLSAASSTESSVDIDELCRVHLPLVHFEVRSIGSRLPSHVYM
DDLVSAGMAALAAAARSFDPSLGVPFGRYAVRRIRGALLDELRSADWATRSLRSKVRRRD
AVHDELAAKLGRRPEVGEVAQALGVSVSELEKLDADLHSSVVLRLDVITDGAGGDGSGVD
ALLPSSVATPEATLLARERRAYLRDAVAVLPERLRVVVRGCFFEDRPMRELAEELGVTES
RISQMRAEALKLLRDGMNSQLSPEMLESGGRGGAGGGGAVARRKAAYYAQVAARSNYRER
LTTAVDALEEITLFSSRESA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagtatctggtctgacagtggattcgtgaccgtttctgatgaaaaccaactc
tccgcagcgagttccactgagagttcggttgatattgatgagttgtgtcgtgtgcacctt
cctttggtgcattttgaggtgaggtcgatcggttctcggttgccttctcatgtgtatatg
gatgatttggtgtctgcgggtatggcggcgttggctgctgccgcgcgctcgtttgatccg
tcgttgggtgtgccgtttggtcggtatgcggtgcggcgtattcgtggtgcgttgttggat
gagttgcgttctgcggactgggctacgcgttcgttgcgctcaaaggtgcgtcgtcgtgat
gcggtgcatgatgagttggctgcgaagttggggcgtcgccctgaggtgggtgaggtggcg
caggcattgggtgtgtcggtgtccgagttggagaagttggatgctgatctgcattcgtcg
gtggtgttgcgtcttgatgtgattactgatggggccggtggtgatggctctggggtggat
gcgttgttgccttcgagtgtggctacgcctgaggcgacgttgttggcgcgtgagcgtcgt
gcgtatttgcgtgatgcggtggctgtgttgcctgagcggttgcgtgttgtggtgcggggg
tgttttttcgaggatcgcccgatgcgtgagttggctgaggagttgggggtgacggagtcg
cgtatttcgcagatgcgtgcggaggcgttgaagttgttgcgtgatgggatgaattcgcag
ttgtcgccggagatgttggagtctggtgggcgtggtggtgctggcggtggtggtgcggta
gcgcggcgtaaggctgcgtattacgcgcaggtcgcggctcgttccaactaccgcgaacga
ctgacgactgccgttgatgccttggaagagatcacgctatttagctcacgtgagtcagcg
tga
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