Drechmeria coniospora: 63713478
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Entry
63713478 CDS
T11322
Symbol
DCS_00835
Name
(RefSeq) nonsense-mediated mRNA decay factor
KO
K14327
regulator of nonsense transcripts 2
Organism
dcon Drechmeria coniospora
Pathway
dcon03013
Nucleocytoplasmic transport
dcon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
63713478 (DCS_00835)
03015 mRNA surveillance pathway
63713478 (DCS_00835)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcon03019
]
63713478 (DCS_00835)
Messenger RNA biogenesis [BR:
dcon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
63713478 (DCS_00835)
mRNA cycle factors
P-body specific factors
63713478 (DCS_00835)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
63713478
NCBI-ProteinID:
XP_040659053
UniProt:
A0A151GRM2
LinkDB
All DBs
Position
01
Genome browser
AA seq
1093 aa
AA seq
DB search
MDRARKRDLRSLNEHLLPVGASLDTSLKKNTAFIKRLRTAVTAATLATFLQEIRTLSLHK
YLSEIVPACYEGLCKLKSAGEIEAGVEIVSALHQRFGPAEFTGYLAWLLGKGMVTPDKSS
LKSLTPDAREKEEKERGIRQRALLRVITELWLVGVLRNLDDAIKPDDGTKGATGNITDLK
PRHNAQKGGSRVDPYPLEVLKDLLGHDRQHANLPLLVVFAKTFSWDVLGVQPTTPDGRKA
VEESGLANSSEGGDHDRNSVDIDDKAAADQPFTPPEVAERFRSVLKRYLDDVTAHIARDQ
KLIQSQARRNAEVYVKSGEVFEDRQANYEKLVKAQDRLVSNAQAVADVIGAEMPDLKESD
DSFATASGSIGLVKTGDYLRSMADGPGIWADEDERRFYENLVDLKGKVPPILLEDGKRKK
VEGDEPIGKKAEASEASEATKAAEDQSTAIANKTIGAQVDALLGRLPELTSKDAIDQTAV
DFCFLNSKASRNRLVKALTEVPRGRSDLLPSWSRLVATLGRYLPDIPKGLVEYLDAEFRS
LQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMNIEILCNLMEN
CGRYLLKNSETSPRMMSFLETLQRKKSVQHIGQPERMLIDNALYYVDPPERPALEQKERT
PMELFVRKLLYNDLTKKNYGKILKQIRRLHWEEADVVSILEKVFSKPGKVRYGNIYLLSI
LLSALHRYHPDFVVRVIDNVVESVSFGLEQNDFRLFQRRIAEVKYLGELYNYRMLEHPVI
IDTLYKILTFGYGGPPVPGRFNPLDPPDDFFRIRLVATTLETCGVFFNRGAAGKKLDCFL
SFFQYYVNTKASLPMEIEFVVQEIFTLTRPHWKMASNLEEATKAFQLAIVQDQKTAGTEK
AAEPDEGTSDASSDEDNELEPYGDGDDESASEDEDEIEQDEDEDSAHESDFNEEAIIVTR
QDEAADPEDEADFEREYAKMMAESLESRKFERKPLFDVALPVRSKNRELPASGTAGEENP
PAGNTMAFSLLTKKGNRQQTRTVELPSDSTFAIALKTQQQAEKEEQQRIKNLVLNYDLQQ
NDDEESEFRSTMA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgccagaaagcgtgatctgcgctctctcaacgagcacctgctgcccgtcggc
gcctcgctcgacacgtctctcaagaagaacacggcgttcatcaaacgccttcgaacggca
gttactgccgccaccctcgccacctttctccaagagatacgaacgctgagcttgcacaaa
tacttgtccgagatcgtgcccgcctgctatgaaggtctttgcaaactgaaatcggctggc
gagatagaggccggcgtcgaaatcgtcagcgccctccaccagcgctttggccccgccgag
tttaccgggtacctcgcctggctgctcggcaagggcatggtcacgcccgacaagagctcc
ctcaagtctctgacgccggatgcgcgcgaaaaggaggaaaaggagcggggcatccgccag
cgggctctgttgagagtcatcaccgagctgtggcttgtcggcgttctcaggaatcttgat
gacgctatcaagcctgatgatggcacgaaaggcgccaccggcaacatcaccgacctcaag
ccgcggcacaacgcccaaaaaggaggcagcagggttgatccgtatccgcttgaggttctg
aaggacctcctgggccacgatcgacaacacgcgaacctacccctgctcgtcgtattcgcc
aaaaccttcagctgggacgttctcggtgtccagcccaccactcccgatggacgaaaggcc
gtcgaagagtccggcttagcgaactcctcggaaggaggggaccatgatcgaaactcggtc
gacatcgacgacaaggccgcggctgaccagccattcaccccgcccgaggtggccgagcgc
tttcgaagcgttctgaagcgttacttggacgacgtgacggcccatattgcccgggaccag
aagttgatccaatcgcaagcccgacgaaatgccgaagtctatgtcaagtccggcgaggtc
ttcgaagatcgtcaggccaactacgagaagttggtcaaggcccaggatcgattggtatcc
aacgcccaggctgttgccgatgtcattggcgccgaaatgccggatctgaaggagtcggat
gactcgtttgcgacggccagcggttccatcggcctcgtcaagacgggagactacttgcga
tccatggccgacggacccggaatctgggccgacgaagacgagcgccgtttctacgagaac
ttggttgatctgaagggcaaggtgcccccgatccttctcgaggacggcaagaggaagaag
gtagagggcgatgagccgattggcaagaaagcggaggcgagcgaggcgagcgaggcgacc
aaggccgcggaagatcagtcaaccgccatcgccaacaagacaatcggtgctcaggtcgat
gccctgctcggacggctgccggagctcactagcaaagatgccatcgaccagactgccgtt
gacttttgcttcctcaactccaaggcatcacggaatcgtctcgtcaaagccctgacggag
gttcccagggggcgaagcgatctgctcccctcttggtcgcgattggtcgccacgttggga
cgctatctgcctgatattccaaaggggctcgtcgaatatctcgacgctgaattccggagc
ttgcagcgtcgcaaggagaaggacttccttggtcaagtccggctgagcaacatccgctat
ctcgccgagctgaccaagtttggcgtcgtccctgagcatgtcgtgtttcattgtctcaaa
gtcagcctcgacgacttttcccgcatgaacattgaaatactctgcaacttgatggagaac
tgtggtcggtacttgctcaagaactcggaaacgtcgccgcggatgatgagcttcttggag
acccttcagcgcaaaaagtcggtccagcacatcggtcaacccgaacggatgctcatcgac
aacgccctgtactatgtcgacccgcccgaacggccagctctcgagcagaaggagcggacg
ccgatggagctctttgttcgaaaactcctctacaacgatctgaccaagaaaaactacggc
aagatcctgaagcagattcgaaggcttcactgggaagaggcagatgttgtctccatcctg
gaaaaggttttctccaaacctggcaaagtcaggtacggaaatatctacctcttgagcatc
ctcttgagcgcgttgcatcgttatcaccccgatttcgttgtcagagtcatcgacaatgtc
gtcgaatccgtaagtttcggcctggagcagaacgactttaggctcttccagcgtcgcatc
gccgaggtcaaatacttgggagagctttataactaccggatgctggagcaccctgtcatc
attgatactttgtacaagatcttgacgtttggatacggggggccaccagttcctggccgt
ttcaacccactcgacccgcctgatgacttcttccgaatccgcctcgtcgccaccacgctg
gagacgtgcggcgtgtttttcaaccgaggggccgccggaaagaagctggactgtttccta
tccttttttcagtactacgtcaacacaaaggcatcactgcctatggaaatcgagtttgtt
gtgcaagaaatattcactttgacgcgaccgcactggaagatggcttcgaacttggaagag
gcaaccaaggctttccagttggccatagtgcaggatcaaaaaaccgccggaaccgagaag
gctgctgagccagatgaagggacgagtgacgcatcgtcggatgaggataacgagctcgag
ccgtacggggatggagacgatgagagcgcgtcggaagacgaggacgagattgagcaggac
gaagacgaggactcggctcacgagagcgatttcaacgaggaggccatcatcgtcactcgg
caagacgaggcggccgacccggaagatgaggctgattttgaacgtgagtatgcgaagatg
atggccgaaagccttgaatcgcgcaagtttgaacgaaagccgttattcgacgtcgcgctg
ccggttcggtccaagaatcgcgagctccccgcatcaggaacggcaggggaggaaaaccct
ccggccggaaacaccatggccttttcgctcttgacgaagaagggaaaccgccagcagacc
cgaacggtggaactcccgtctgattctacattcgccatcgcgttgaaaacacaacagcag
gcggaaaaggaggagcagcagcggatcaagaacctcgtgctcaactatgatctacagcag
aacgatgatgaagagagtgagtttcgttcaaccatggcgtaa
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